Chr:
Chr8
Start:
3597816
End:
3597839
Strand:
-
Sequence:
AGGAGGUCUGGAGAGUUAUGUGGC
Length:
24
precursor sequence:
AUCUGAAAGUAGGAGGUCUGGAGAGUUAUGUGGCAGGAAGCCAAGCCAGGAAAUGUAAUGUAAUCGACAGCUCUAACUGAAACAUCCCUUAUAAGUUAUUUUUAGGGAACAAACCCUUAUAAGUAAUCACACUUCAUAAUGAGGCACAUUACUCCUCUAACUGAAACAUCCCUUAUAAGUUAUUUUUAGGGAACAAACCCUUAUAAGUAAUCACACUUCAUAAUGAGGCACAUUACUCAUCUAUAAAAUCAAUGUGGAUAGAUUGAUCAUCAUGACCUACAUGUGAGCUGUCGAUUAGAUUAGAUUUCCUGGCUUCCUGUCACAUAACUCUCCACGCCUCCUAUUUUCAGAUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
94
NEP:
34.31%
LE_num:
LEP:
12.04%
ME_num:
MEP:
51.09%
HE_num:
HEP:
2.55%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
seed
Tau :
0.83
Avg Expression:
6.55
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| Tip: osa-miR5807_miRbase is not a differential expression ncRNA. | |||