RiceNCexp
Rice Non-coding RNA Co-Expression Atlas

The detail of the expression capacity of the osa-miR5807_miRbase

Sample_IDTissueStimulusExpressionExpression Capacity
SRR8258059leaf_sheathR_bph_late0.99MC
SRR10690152leafIRBB5_0h0.87MC
SRR7058097leafrice_mock2.34MC
SRR12416731lamina_jointsRNA_LJ_S10.33MC
SRR7058098leafrice_RSV1.99MC
SRR10690150leafIR24_Xanthomonas oryzae pv. oryzae_24h0.53MC
SRR10690151leafIRBB5_0h0.82MC
SRR4098204seedlingDrought (air-dried)0.70MC
SRR10690156leafIRBB5_Xanthomonas oryzae pv. oryzae_8h0.44MC
SRR1612403leafWT wild type (miRNA)1.02MC
SRR10690154leafIRBB5_Xanthomonas oryzae pv. oryzae_8h0.63MC
SRR10690155leafIRBB5_Xanthomonas oryzae pv. oryzae_8h0.37MC
SRR3955345panicle"1.0-2.0 cm panicles, short-day growth conditions"5.36MC
SRR504363leaf93-11 X NPB0.95MC
SRR9070101shoot_baseWT_base0.44MC
SRR426799leafmock-treated susceptible rice line3.64MC
SRR089619paniclecontrol2.58MC
SRR447135shootAs(III) 20 uM0.36MC
SRR447132shootcontrol for As(III) 20/80 uM0.46MC
SRR447130rootAs(III) 20 uM0.35MC
SRR1849767leafControl 30min0.91MC
SRR5929446leaf"O sativa, IL, adapters: standard"1.14MC
SRR6498702leaf"WT, M. oryzae Infected"2.01MC
SRR6498701leaf"WT, Control"1.55MC
SRR6498700leaf"WT, M. oryzae Infected"1.60MC
SRR771496shootShoot Cultivar Nipponbare RSF2.10MC
SRR5049787ovaryfloret length/mm: 3.8-4.00.73MC
SRR6498698leaf"DCL1a mutant, M. oryzae Infected"1.33MC
SRR12416749bladesRNA_Blade_S50.28MC
SRR12416748bladesRNA_Blade_S50.41MC
SRR12416741bladesRNA_Blade_S10.51MC
SRR12416740bladesRNA_Blade_S11.18MC
SRR12416743bladesRNA_Blade_S20.19MC
SRR12416742bladesRNA_Blade_S20.51MC
SRR12416745bladesRNA_Blade_S30.59MC
SRR12416744bladesRNA_Blade_S30.40MC
SRR12416747bladesRNA_Blade_S40.53MC
SRR12416746bladesRNA_Blade_S40.45MC
SRR771497shootShoot Cultivar Nipponbare RSG2.99MC
SRR3955339panicle"1.0-2.0 cm panicles, long-day growth conditions"6.02MC
SRR3955338panicle"0.5-1.0 cm panicles, long-day growth conditions"5.72MC
SRR3955337panicle"0.5-1.0 cm panicles, long-day growth conditions"6.74MC
SRR1849771leafControl 120min0.99MC
SRR7058096leafrice_mock4.16MC
SRR1742988endosperm4X_En_sRNA0.69MC
SRR1742989endosperm4X_En_sRNA0.76MC
SRR2154081seedlingTaipei309_seedling1.97MC
SRR5049790ovaryfloret length/mm: 3.1-3.31.79MC
SRR3955359panicle"3.0-4.0 mm florets, short-day growth conditions"1.57MC
SRR3955358panicle"1.0-2.0 cm panicles, short-day growth conditions"3.80MC
SRR5049792ovaryfloret length/mm: 6.0-6.51.58MC
SRR976171lamina_jointwild type0.69MC
SRR4098208rootNo treatment3.67MC
SRR4098209leafNo treatment0.90MC
SRR3955348panicle"3.0-4.0 mm florets, short-day growth conditions"1.96MC
SRR3955349panicle"0.5-1.0 cm panicles, long-day growth conditions"3.90MC
SRR9070100shoot_baseWT_base0.30MC
SRR4098205seedlingHeat (50C)1.10MC
SRR3955342panicle"3.0-4.0 mm florets, long-day growth conditions"2.49MC
SRR3955343panicle"0.5-1.0 cm panicles, short-day growth conditions"7.20MC
SRR3955340panicle"1.0-2.0 cm panicles, long-day growth conditions"4.96MC
SRR3955341panicle"3.0-4.0 mm florets, long-day growth conditions"3.77MC
SRR3955347panicle"3.0-4.0 mm florets, short-day growth conditions"1.82MC
SRR1742996endosperm4X2_En_sRNA0.20MC
SRR1742995endosperm4X2_En_sRNA0.47MC
SRR1742993endosperm2X4_En_sRNA0.14MC
SRR1742990endosperm4X_En_sRNA0.61MC
SRR2862364leafmock leaf cells0.65MC
SRR2862365leafmock leaf cells0.98MC
SRR2862366leafviruliferous Infected leaf cells3.65MC
SRR4098206seedlingHighlight (50000 Lux)1.90MC
SRR2862363leafmock leaf cells3.46MC
SRR8649147paniclepanicle tissue3.38MC
SRR4098207panicleNo treatment0.27MC
SRR10704055leafCK0.56MC
SRR10704057leafCK0.37MC
SRR10704056leafCK0.47MC
SRR10704059leafGlyphosate1.16MC
SRR3955354panicle"3.0-4.0 mm florets, long-day growth conditions"1.27MC
SRR9070102shoot_baseWT_base0.66MC
SRR6498699leaf"WT, Control"0.99MC
SRR2154079seedlingHeukgyeong_seedling3.67MC
SRR3955350panicle"0.5-1.0 cm panicles, long-day growth conditions"4.34MC
SRR10690145leafIR24_Xanthomonas oryzae pv. oryzae_8h0.94MC
SRR10690144leafIR24_0h0.50MC
SRR10690147leafIR24_Xanthomonas oryzae pv. oryzae_8h0.42MC
SRR10690146leafIR24_Xanthomonas oryzae pv. oryzae_8h0.75MC
SRR10690143leafIR24_0h0.77MC
SRR10690142leafIR24_0h0.92MC
SRR3955353panicle"3.0-4.0 mm florets, long-day growth conditions"1.24MC
SRR3955352panicle"1.0-2.0 cm panicles, long-day growth conditions"5.16MC
SRR10690149leafIR24_Xanthomonas oryzae pv. oryzae_24h0.26MC
SRR10690148leafIR24_Xanthomonas oryzae pv. oryzae_24h0.56MC
SRR4098203seedlingNo treatment1.99MC
SRR5049783antherfloret length/mm: 4.3-4.50.41MC
SRR5049789ovaryfloret length/mm: >6.50.15MC
SRR8258063leaf_sheathS_bph feeding1.44MC
SRR8258060leaf_sheathR_bph_late0.72MC
SRR12416738lamina_jointsRNA_LJ_S50.21MC
SRR10690158leafIRBB5_Xanthomonas oryzae pv. oryzae_24h0.57MC
SRR10690159leafIRBB5_Xanthomonas oryzae pv. oryzae_24h0.48MC
SRR1849784rootControl 120min2.61MC
SRR12416730lamina_jointsRNA_LJ_S11.39MC
SRR10690153leafIRBB5_0h0.44MC
SRR12416732lamina_jointsRNA_LJ_S21.67MC
SRR12416733lamina_jointsRNA_LJ_S22.08MC
SRR12416734lamina_jointsRNA_LJ_S30.63MC
SRR10690157leafIRBB5_Xanthomonas oryzae pv. oryzae_24h0.72MC
SRR12416736lamina_jointsRNA_LJ_S40.42MC
SRR12416737lamina_jointsRNA_LJ_S40.37MC
SRR3110556shootshoot control3.55MC
SRR771494rootRoot Cultivar Nipponbare RRF2.23MC
SRR3955360panicle"3.0-4.0 mm florets, short-day growth conditions"1.61MC
SRR771495rootRoot Cultivar Nipponbare RRG3.08MC
SRR1061612panicleNormal0.64MC
SRR1061613panicleHeat Stress0.27MC
SRR3955355panicle"0.5-1.0 cm panicles, short-day growth conditions"5.34MC
SRR4098202seedlingHigh-salt (300 mM NaCl)1.92MC
SRR3955346panicle"1.0-2.0 cm panicles, short-day growth conditions"4.61MC
SRR447127rootcontrol for As(III) 20/80 uM0.40MC
SRR2544788embryo24 hours imbibition2.87MC
SRR3955344panicle"0.5-1.0 cm panicles, short-day growth conditions"4.02MC
SRR089621paniclecold0.60MC
SRR089620panicledrought1.40MC
SRR089622paniclesalt1.43MC
SRR504360leafNipponbare7.18MC
SRR2544787embryo12 hours imbibition3.70MC
SRR2544786embryodry seed1.47MC
SRR4098172seedlingCold (4C)0.96MC
SRR3955357panicle"1.0-2.0 cm panicles, short-day growth conditions"5.09MC
SRR12416735lamina_jointsRNA_LJ_S30.80MC
SRR1740023seedlingIR64-Control1.50MC
SRR2154080seedlingNipponbare_seedling0.70MC
SRR3955356panicle"0.5-1.0 cm panicles, short-day growth conditions"4.88MC
SRR3955351panicle"1.0-2.0 cm panicles, long-day growth conditions"1.68MC
SRR8258061leaf_sheathS_bph feeding0.97MC
SRR5049791ovaryfloret length/mm: 4.3-4.51.51MC
SRR1654490leafwild type5.32MC
SRR3110557shootshoot treated1.01MC
SRR504362leafNPB X 93-111.45MC