Chr:
Chr2
Start:
26130079
End:
26130099
Strand:
+
Sequence:
GGAAUGUUGUCUGGCUCGAGG
Length:
21
precursor sequence:
GAAGCUUUUUCACUUUGAGGGGAAUGUUGUCUGGCUCGAGGUGCAUGGAGAAACCUCUGAUCGAUCAGGUUUGAUCUGUAGAGACUGAUCUCGGACCAGGCUUCAUUCCCCUCAAGUAAAGCUCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
54.01%
HE_num:
HEP:
45.99%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.71
Avg Expression:
53.92
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // mature panicle // Wild type--/--PB-1 // mature panicle // ago18(2) | -1.02444935141366 | 0.0380106589861421 |
| 2 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 12h | -4.48838412549583 | 0.00523395695917666 |
| 3 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | -3.53864116384674 | 0.000183041955790108 |
| 4 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(2) | -1.44441296966184 | 0.035912208506304 |
| 5 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -1.29366038623859 | 0.0448313386165254 |