| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 109.71 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 98.67 | HC |
| SRR8258050 | leaf_sheath | R_bph | 95.35 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 117.12 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 56.24 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 36.50 | HC |
| SRR10690152 | leaf | IRBB5_0h | 92.32 | HC |
| SRR7058097 | leaf | rice_mock | 53.22 | HC |
| SRR7058098 | leaf | rice_RSV | 106.06 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 45.75 | HC |
| SRR10690151 | leaf | IRBB5_0h | 76.15 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 52.97 | HC |
| SRR1061624 | panicle | Normal | 11.71 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 52.00 | HC |
| SRR1061622 | flag_leaf | Normal | 23.30 | HC |
| SRR1061620 | flag_leaf | Normal | 22.71 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 70.61 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 55.67 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 17.47 | HC |
| SRR1013787 | panicle | PA64s_PA | 45.92 | HC |
| SRR1013789 | panicle | 93-11_PA | 34.12 | HC |
| SRR1013788 | panicle | LYP9_PA | 48.27 | HC |
| SRR9070101 | shoot_base | WT_base | 6.15 | HC |
| SRR447130 | root | As(III) 20 uM | 15.10 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 922.36 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 9.76 | HC |
| SRR3203907 | leaf | WT | 33.62 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 19.58 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 14.29 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 10.30 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 23.23 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 12.62 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 25.67 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 15.42 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 12.08 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 6.85 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 8.42 | HC |
| SRR7058096 | leaf | rice_mock | 74.78 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 6.49 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 17.26 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 18.66 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 68.50 | HC |
| SRR4098208 | root | No treatment | 32.97 | HC |
| SRR4098209 | leaf | No treatment | 48.03 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 9.02 | HC |
| SRR9070100 | shoot_base | WT_base | 7.08 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 6.88 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 6.94 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 4.77 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 3.13 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 6.64 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 6.18 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 254.18 | HC |
| SRR2862363 | leaf | mock leaf cells | 52.65 | HC |
| SRR4098207 | panicle | No treatment | 28.17 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 9.50 | HC |
| SRR9070102 | shoot_base | WT_base | 6.26 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 93.38 | HC |
| SRR10690144 | leaf | IR24_0h | 61.66 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 52.49 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 52.53 | HC |
| SRR10690143 | leaf | IR24_0h | 60.08 | HC |
| SRR10690142 | leaf | IR24_0h | 57.56 | HC |
| SRR2646852 | panicle | FP | 19.95 | HC |
| SRR2646853 | panicle | FP | 30.30 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 55.46 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 56.05 | HC |
| SRR2646854 | panicle | SP | 15.65 | HC |
| SRR2646855 | panicle | SP | 13.90 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 27.21 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 10.93 | HC |
| SRR6365692 | panicle | Wild type | 27.34 | HC |
| SRR6365693 | panicle | Wild type | 17.85 | HC |
| SRR6365694 | panicle | Wild type | 16.51 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 462.29 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 11.76 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 64.05 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 55.89 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 49.71 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 15.37 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 48.84 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 51.00 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 110.92 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 63.80 | HC |
| SRR6365691 | panicle | Wild type | 17.87 | HC |
| SRR10690153 | leaf | IRBB5_0h | 218.43 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 11.50 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 11.31 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 13.85 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 75.76 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 6.53 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 7.77 | HC |
| SRR3110556 | shoot | shoot control | 122.51 | HC |
| SRR1061616 | panicle | Normal | 10.67 | HC |
| SRR1061617 | panicle | Heat Stress | 7.52 | HC |
| SRR1061614 | panicle | Normal | 21.88 | HC |
| SRR1061615 | panicle | Heat Stress | 11.26 | HC |
| SRR1061612 | panicle | Normal | 14.10 | HC |
| SRR1061613 | panicle | Heat Stress | 8.75 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 87.92 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 15.48 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 15.86 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 18.67 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 33.21 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 39.10 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 49.70 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 14.16 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 14.35 | HC |
| SRR4098172 | seedling | Cold (4C) | 14.92 | HC |
| SRR3140953 | leaf | "45C, 0h" | 9.05 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 69.88 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 59.59 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 12.21 | HC |
| SRR8258048 | leaf_sheath | R_bph | 97.93 | HC |
| SRR1740023 | seedling | IR64-Control | 82.05 | HC |
| SRR1740025 | seedling | PK-Control | 80.14 | HC |
| SRR1740024 | seedling | N22-Control | 116.23 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 7.55 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 9.82 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 55.14 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 8.85 | HC |
| SRR1654490 | leaf | wild type | 27.29 | HC |
| SRR3110557 | shoot | shoot treated | 100.72 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 4.18 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 26.66 | HC |
| SRR8258051 | leaf_sheath | R_bph | 89.64 | HC |