Chr:
Chr2
Start:
23901168
End:
23901188
Strand:
-
Sequence:
UUAGAUGACCAUCAGCAAACA
Length:
21
precursor sequence:
UAUUGCUACCCAUGAACCUGUUUUGUUGCUGGUCAUCUAGCUACCCGUGCAUGCCUGGAGAUUGGAGAAUAAUUGACGAUGCAGCAGUCGGCUUAUUGGCUCUUGGGCACGCGUGGUUAGAUGACCAUCAGCAAACAAGUUCGUGAGACGCAUGCAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
10
NEP:
3.65%
LE_num:
LEP:
4.38%
ME_num:
MEP:
33.58%
HE_num:
HEP:
58.39%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.74
Avg Expression:
194.95
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -5.66953219942009 | 3.31369283006602e-188 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -5.53226456719441 | 2.46470145145815e-240 |
| 3 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.04009003519513 | 0.0141383499529586 |
| 4 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | -2.83911219613933 | 0.000821919789249841 |