Chr:
Chr6
Start:
28489798
End:
28489818
Strand:
+
Sequence:
UUGAGUGCAGCGUUGAUGAAC
Length:
21
precursor sequence:
ACAGAGAAUCAAAUGCAUCAUUGAGUGCAGCGUUGAUGAACAACGGUAACCGGUCCAUGUUGAUGCGCAUUUGGCCGGUGAUCUGAUCAUCAUCAGCGCUUCACUCAAUCAUGCGUUUGGCAUCUCUGCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
2
NEP:
0.73%
LE_num:
LEP:
0.73%
ME_num:
MEP:
32.48%
HE_num:
HEP:
66.06%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.94
Avg Expression:
4498.76
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | C101LAC // leaves // control 0 hour--/--C101LAC // leaves // 8 hpi;M.oryzae | 1.29240684192434 | 0.000297860164949433 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | 1.24511348767198 | 0.0110970122656194 |
| 3 | glyphosate-tolerant variety // leaves // CK--/--glyphosate-tolerant variety // leaves // Glyphosate | 2.2348138999486 | 1.25096155186514e-05 |