| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 42.38 | HC |
| SRR3140955 | leaf | "45C, 12h" | 13.70 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 48.18 | HC |
| SRR8258050 | leaf_sheath | R_bph | 88.18 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 39.00 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 35.07 | HC |
| SRR10690152 | leaf | IRBB5_0h | 414.03 | HC |
| SRR7058097 | leaf | rice_mock | 1513.18 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 43.79 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 6.23 | HC |
| SRR7058098 | leaf | rice_RSV | 2053.05 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 709.49 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 302.58 | HC |
| SRR2154077 | seedling | KDM105_seedling | 160.34 | HC |
| SRR2154074 | seed | Nipponbare_seed | 40.93 | HC |
| SRR10690151 | leaf | IRBB5_0h | 442.74 | HC |
| SRR2154072 | seed | Rathuwee_seed | 14.85 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 17.33 | HC |
| SRR2154070 | seed | Guangluai4_seed | 19.60 | HC |
| SRR2154071 | seed | KDM105_seed | 12.76 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 849.26 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 771.79 | HC |
| SRR1061625 | panicle | Heat Stress | 50.41 | HC |
| SRR1061624 | panicle | Normal | 184.86 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 21.09 | HC |
| SRR1061622 | flag_leaf | Normal | 1889.85 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 1837.55 | HC |
| SRR1061620 | flag_leaf | Normal | 2077.51 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1092.52 | HC |
| SRR10704058 | leaf | Glyphosate | 86.48 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1080.30 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 8447.43 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 2719.96 | HC |
| SRR1013787 | panicle | PA64s_PA | 193.07 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 10204.40 | HC |
| SRR504363 | leaf | 93-11 X NPB | 357.18 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 120.91 | HC |
| SRR1013789 | panicle | 93-11_PA | 74.25 | HC |
| SRR1013788 | panicle | LYP9_PA | 89.71 | HC |
| SRR9070101 | shoot_base | WT_base | 4.91 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 49.45 | HC |
| SRR6810105 | panicle | panicle | 8.84 | HC |
| SRR089619 | panicle | control | 13.14 | HC |
| SRR447135 | shoot | As(III) 20 uM | 47.33 | HC |
| SRR447130 | root | As(III) 20 uM | 15.46 | HC |
| SRR1849765 | leaf | Control 30min | 58.12 | HC |
| SRR1849767 | leaf | Control 30min | 35.36 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 64.54 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 113.73 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 122.28 | HC |
| SRR6498701 | leaf | "WT, Control" | 63.16 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 133.84 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 7576.90 | HC |
| SRR3203907 | leaf | WT | 349.42 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 30.63 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 19.33 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 23.33 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 7.59 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 18.32 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 6.01 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 13.54 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 21.13 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 12.06 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 12.56 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 30.76 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 1665.35 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 44.02 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 89.96 | HC |
| SRR1849772 | leaf | Control 120min | 37.85 | HC |
| SRR1849771 | leaf | Control 120min | 63.24 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 49.56 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 158.16 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 52.68 | HC |
| SRR3130370 | leaf | control 8 hour | 54.37 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 46.99 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 37.59 | HC |
| SRR7058096 | leaf | rice_mock | 3081.25 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 322.77 | HC |
| SRR447136 | shoot | As(III) 80 uM | 20.32 | HC |
| SRR10704060 | leaf | Glyphosate | 80.84 | HC |
| SRR2154075 | seed | Taipei309_seed | 74.79 | HC |
| SRR3140952 | leaf | "45C, 0h" | 10.09 | HC |
| SRR976171 | lamina_joint | wild type | 5153.53 | HC |
| SRR4098208 | root | No treatment | 190.79 | HC |
| SRR4098209 | leaf | No treatment | 314.32 | HC |
| SRR3130369 | leaf | control 8 hour | 25.40 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 54.23 | HC |
| SRR9070100 | shoot_base | WT_base | 6.70 | HC |
| SRR4098205 | seedling | Heat (50C) | 2380.00 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 1127.24 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 12.36 | HC |
| SRR3130365 | leaf | control 0 hour | 28.92 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 55.52 | HC |
| SRR3130366 | leaf | control 0 hour | 29.75 | HC |
| SRR2862364 | leaf | mock leaf cells | 26.45 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 1444.73 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 3529.82 | HC |
| SRR2862363 | leaf | mock leaf cells | 1131.93 | HC |
| SRR4098207 | panicle | No treatment | 228.84 | HC |
| SRR10704059 | leaf | Glyphosate | 14.90 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 5855.63 | HC |
| SRR9070102 | shoot_base | WT_base | 4.37 | HC |
| SRR6498699 | leaf | "WT, Control" | 135.96 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 112.65 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 368.10 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1291.33 | HC |
| SRR10690144 | leaf | IR24_0h | 990.25 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 824.72 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 1207.14 | HC |
| SRR10690143 | leaf | IR24_0h | 942.06 | HC |
| SRR10690142 | leaf | IR24_0h | 1130.20 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1076.97 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 1206.32 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 33.07 | HC |
| SRR4098203 | seedling | No treatment | 3205.46 | HC |
| SRR6365693 | panicle | Wild type | 8.26 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 141.07 | HC |
| SRR6810101 | seedling | seedling | 1574.02 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 33.44 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 28.62 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 26.64 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 51.96 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 37.00 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 5.13 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 9.75 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 690.24 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 617.55 | HC |
| SRR1849784 | root | Control 120min | 71.65 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 10.55 | HC |
| SRR10690153 | leaf | IRBB5_0h | 533.66 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 8.66 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 715.81 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 20.03 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 11.50 | HC |
| SRR3110556 | shoot | shoot control | 154.10 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 3299.25 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 7644.17 | HC |
| SRR1061616 | panicle | Normal | 22.09 | HC |
| SRR1061617 | panicle | Heat Stress | 54.95 | HC |
| SRR1061614 | panicle | Normal | 35.92 | HC |
| SRR1061615 | panicle | Heat Stress | 80.28 | HC |
| SRR1061612 | panicle | Normal | 101.77 | HC |
| SRR1061613 | panicle | Heat Stress | 186.93 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 1335.06 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 1112.31 | HC |
| SRR1061618 | flag_leaf | Normal | 8557.08 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 5657.45 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 132.37 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 83.70 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 31.11 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 31.75 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 32.07 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 150.11 | HC |
| SRR3140954 | leaf | "45C, 12h" | 45.66 | HC |
| SRR089621 | panicle | cold | 18.05 | HC |
| SRR089620 | panicle | drought | 20.61 | HC |
| SRR3140957 | leaf | "45C, 24h" | 20.29 | HC |
| SRR089622 | panicle | salt | 11.79 | HC |
| SRR504360 | leaf | Nipponbare | 260.83 | HC |
| SRR504361 | leaf | Nov-93 | 340.29 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 138.14 | HC |
| SRR2544786 | embryo | dry seed | 88.27 | HC |
| SRR4098172 | seedling | Cold (4C) | 1061.62 | HC |
| SRR3140956 | leaf | "45C, 24h" | 24.89 | HC |
| SRR3140953 | leaf | "45C, 0h" | 19.70 | HC |
| SRR6810102 | seedling | seedling | 1690.69 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 36.22 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 54.29 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 19.50 | HC |
| SRR8258048 | leaf_sheath | R_bph | 64.92 | HC |
| SRR1740023 | seedling | IR64-Control | 71.59 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 169.73 | HC |
| SRR1740025 | seedling | PK-Control | 76.21 | HC |
| SRR1740024 | seedling | N22-Control | 82.91 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 55.99 | HC |
| SRR1654490 | leaf | wild type | 181.17 | HC |
| SRR3110557 | shoot | shoot treated | 320.94 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 312.85 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 425.27 | HC |
| SRR8258051 | leaf_sheath | R_bph | 73.83 | HC |
| SRR504362 | leaf | NPB X 93-11 | 381.72 | HC |