Chr:
Chr2
Start:
23605941
End:
23605961
Strand:
+
Sequence:
UCGAUAAACCUCUGCAUCCAG
Length:
21
precursor sequence:
GGGGGUUGGUGGUGAUGCCUGGGCGCAGUGGUUUAUCGAUCCCUUCCCUGCCUUGUGGCGCUGAUCCAGGAGCGGCGAAUUUCUUUGAGAGGGUGUUCUUUUUUUUUCUUCCUUUUGGUCCUUGUUGCAGCCAACGACAACGCGGGAAUCGAUCGAUAAACCUCUGCAUCCAGUUCUCGCCUUUUUGUGUUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
MEP:
4.38%
HE_num:
HEP:
95.62%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.86
Avg Expression:
1169.98
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | 1.18941736824362 | 0.000388174318033652 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.25120378885381 | 2.77128586666929e-22 |
| 3 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | -1.05980520156288 | 0.0418226384423073 |
| 4 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_8h | -1.45477729377333 | 2.98371541580652e-05 |