| SRR3140952 | leaf | "45C, 0h" | 162.23 | HC |
| SRR8258057 | leaf_sheath | R_bph_eaR_bphly | 1870.26 | HC |
| SRR3140955 | leaf | "45C, 12h" | 43.70 | HC |
| SRR8258053 | leaf_sheath | R_bph_eaR_bphly | 1786.53 | HC |
| SRR5049778 | anther | floret length/mm: 2.6-2.8 | 34.23 | HC |
| SRR8258050 | leaf_sheath | R_bph | 1845.19 | HC |
| SRR5120079 | leaf_sheath | PC_0 | 691.67 | HC |
| SRR8258055 | leaf_sheath | R_bph_eaR_bphly | 1704.60 | HC |
| SRR8258059 | leaf_sheath | R_bph_late | 1591.04 | HC |
| SRR8258058 | leaf_sheath | R_bph_late | 967.12 | HC |
| SRR10690152 | leaf | IRBB5_0h | 233.11 | HC |
| SRR6810106 | panicle | panicle | 35.13 | HC |
| SRR7058097 | leaf | rice_mock | 6656.72 | HC |
| SRR771500 | endosperm | Endosperm Cultivar Kitaake KNA | 8.62 | HC |
| SRR12416731 | lamina_joint | sRNA_LJ_S1 | 15.35 | HC |
| SRR7058098 | leaf | rice_RSV | 3295.63 | HC |
| SRR10690150 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 425.91 | HC |
| SRR3234043 | pollen | floret length/mm: 2.50-3.00 | 53.02 | HC |
| SRR2154076 | seedling | Guangluai4_seedling | 34.65 | HC |
| SRR2154077 | seedling | KDM105_seedling | 56.21 | HC |
| SRR2154074 | seed | Nipponbare_seed | 9.88 | HC |
| SRR10690151 | leaf | IRBB5_0h | 274.88 | HC |
| SRR2154072 | seed | Rathuwee_seed | 6.49 | HC |
| SRR2154073 | seed | Heukgyeong_seed | 10.77 | HC |
| SRR2154070 | seed | Guangluai4_seed | 8.57 | HC |
| SRR2154071 | seed | KDM105_seed | 5.78 | HC |
| SRR4098204 | seedling | Drought (air-dried) | 17.67 | HC |
| SRR10690156 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 483.16 | HC |
| SRR1061625 | panicle | Heat Stress | 43.01 | HC |
| SRR1061624 | panicle | Normal | 112.29 | HC |
| SRR1612403 | leaf | WT wild type (miRNA) | 161.32 | HC |
| SRR1061622 | flag_leaf | Normal | 98.31 | HC |
| SRR1061621 | flag_leaf | Heat Stress | 201.85 | HC |
| SRR1061620 | flag_leaf | Normal | 184.85 | HC |
| SRR10690154 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 287.16 | HC |
| SRR10704058 | leaf | Glyphosate | 151.62 | HC |
| SRR447128 | root | As(III) 20 uM | 6.58 | HC |
| SRR10690155 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_8h | 155.86 | HC |
| SRR3234042 | pollen | floret length/mm: 5.50-6.00 | 98.54 | HC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 21.84 | HC |
| SRR1013785 | flag_leaf | LYP9_FL | 254.69 | HC |
| SRR1013784 | flag_leaf | PA64s_FL | 203.80 | HC |
| SRR1013787 | panicle | PA64s_PA | 40.68 | HC |
| SRR1013786 | flag_leaf | 93-11_FL | 234.32 | HC |
| SRR771498 | endosperm | Endosperm Cultivar Nipponbare NNA | 21.48 | HC |
| SRR1013789 | panicle | 93-11_PA | 19.91 | HC |
| SRR1013788 | panicle | LYP9_PA | 31.12 | HC |
| SRR9070101 | shoot_base | WT_base | 172.93 | HC |
| SRR426799 | leaf | mock-treated susceptible rice line | 55.51 | HC |
| SRR6810105 | panicle | panicle | 27.65 | HC |
| SRR089619 | panicle | control | 75.76 | HC |
| SRR447134 | shoot | As(III) 80 uM | 29.32 | HC |
| SRR447131 | root | As(III) 80 uM | 16.03 | HC |
| SRR447130 | root | As(III) 20 uM | 22.76 | HC |
| SRR1849765 | leaf | Control 30min | 195.55 | HC |
| SRR1849767 | leaf | Control 30min | 194.04 | HC |
| SRR1849768 | leaf | Margaporthe oryzae 30min | 45.20 | HC |
| SRR1849769 | leaf | Margaporthe oryzae 30min | 291.42 | HC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 126.03 | HC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 615.79 | HC |
| SRR6498701 | leaf | "WT, Control" | 618.38 | HC |
| SRR6498700 | leaf | "WT, M. oryzae Infected" | 624.70 | HC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 402.35 | HC |
| SRR5049787 | ovary | floret length/mm: 3.8-4.0 | 276.83 | HC |
| SRR3203907 | leaf | WT | 50.01 | HC |
| SRR6498698 | leaf | "DCL1a mutant, M. oryzae Infected" | 576.45 | HC |
| SRR12416749 | blade | sRNA_Blade_S5 | 352.12 | HC |
| SRR12416748 | blade | sRNA_Blade_S5 | 223.23 | HC |
| SRR12416741 | blade | sRNA_Blade_S1 | 44.91 | HC |
| SRR12416740 | blade | sRNA_Blade_S1 | 83.35 | HC |
| SRR12416743 | blade | sRNA_Blade_S2 | 40.88 | HC |
| SRR12416742 | blade | sRNA_Blade_S2 | 76.49 | HC |
| SRR12416745 | blade | sRNA_Blade_S3 | 130.56 | HC |
| SRR12416744 | blade | sRNA_Blade_S3 | 168.01 | HC |
| SRR12416747 | blade | sRNA_Blade_S4 | 125.24 | HC |
| SRR12416746 | blade | sRNA_Blade_S4 | 209.01 | HC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 166.42 | HC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 19.96 | HC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 16.41 | HC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 29.89 | HC |
| SRR447129 | root | As(III) 80 uM | 10.78 | HC |
| SRR1849776 | leaf | Margaporthe oryzae 120min | 96.87 | HC |
| SRR1849775 | leaf | Margaporthe oryzae 120min | 231.96 | HC |
| SRR1849774 | leaf | Margaporthe oryzae 120min | 272.60 | HC |
| SRR1849773 | leaf | Control 120min | 313.95 | HC |
| SRR1849772 | leaf | Control 120min | 211.89 | HC |
| SRR1849771 | leaf | Control 120min | 267.78 | HC |
| SRR1849770 | leaf | Margaporthe oryzae 30min | 236.79 | HC |
| SRR3130372 | leaf | 24 hpi;M.oryzae | 74.14 | HC |
| SRR3130373 | leaf | 48 hpi;M.oryzae | 22.53 | HC |
| SRR3130370 | leaf | control 8 hour | 66.65 | HC |
| SRR3130371 | leaf | 24 hpi;M.oryzae | 79.34 | HC |
| SRR3130374 | leaf | 48 hpi;M.oryzae | 36.21 | HC |
| SRR7058096 | leaf | rice_mock | 7478.36 | HC |
| SRR1742988 | endosperm | 4X_En_sRNA | 29.22 | HC |
| SRR1742989 | endosperm | 4X_En_sRNA | 41.92 | HC |
| SRR2154081 | seedling | Taipei309_seedling | 71.07 | HC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 201.19 | HC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 24.23 | HC |
| SRR5120084 | leaf_sheath | P15_48 | 533.11 | HC |
| SRR447136 | shoot | As(III) 80 uM | 23.48 | HC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 13.95 | HC |
| SRR5120083 | leaf_sheath | P15_6 | 695.88 | HC |
| SRR5049792 | ovary | floret length/mm: 6.0-6.5 | 155.17 | HC |
| SRR10704060 | leaf | Glyphosate | 80.61 | HC |
| SRR5120082 | leaf_sheath | P15_0 | 633.69 | HC |
| SRR5049779 | anther | floret length/mm: 3.8-4.0 | 42.32 | HC |
| SRR976171 | lamina_joint | wild type | 275.75 | HC |
| SRR4098208 | root | No treatment | 52.13 | HC |
| SRR4098209 | leaf | No treatment | 134.54 | HC |
| SRR3130369 | leaf | control 8 hour | 45.99 | HC |
| SRR3130368 | leaf | 8 hpi;M.oryzae | 53.04 | HC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 19.16 | HC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 27.06 | HC |
| SRR9070100 | shoot_base | WT_base | 236.60 | HC |
| SRR4098205 | seedling | Heat (50C) | 34.76 | HC |
| SRR6810104 | flag_leaf | flag_leaf | 152.43 | HC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 17.55 | HC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 23.49 | HC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 14.61 | HC |
| SRR3955341 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 27.23 | HC |
| SRR3130365 | leaf | control 0 hour | 84.91 | HC |
| SRR3955347 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 26.84 | HC |
| SRR3130367 | leaf | 8 hpi;M.oryzae | 38.94 | HC |
| SRR3130366 | leaf | control 0 hour | 55.51 | HC |
| SRR1742996 | endosperm | 4X2_En_sRNA | 51.56 | HC |
| SRR1742995 | endosperm | 4X2_En_sRNA | 51.37 | HC |
| SRR1742994 | endosperm | 4X2_En_sRNA | 27.90 | HC |
| SRR1742993 | endosperm | 2X4_En_sRNA | 28.53 | HC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 38.35 | HC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 38.91 | HC |
| SRR1742990 | endosperm | 4X_En_sRNA | 36.25 | HC |
| SRR2862364 | leaf | mock leaf cells | 203.04 | HC |
| SRR2862365 | leaf | mock leaf cells | 127.30 | HC |
| SRR2862366 | leaf | viruliferous Infected leaf cells | 228.40 | HC |
| SRR2862367 | leaf | viruliferous Infected leaf cells | 124.13 | HC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 56.69 | HC |
| SRR2862363 | leaf | mock leaf cells | 256.15 | HC |
| SRR8649147 | panicle | panicle tissue | 37.90 | HC |
| SRR4098207 | panicle | No treatment | 30.37 | HC |
| SRR10704055 | leaf | CK | 78.17 | HC |
| SRR10704057 | leaf | CK | 207.66 | HC |
| SRR10704056 | leaf | CK | 108.08 | HC |
| SRR10704059 | leaf | Glyphosate | 59.13 | HC |
| SRR1061623 | flag_leaf | Heat Stress | 171.85 | HC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 15.60 | HC |
| SRR9070102 | shoot_base | WT_base | 161.31 | HC |
| SRR6498699 | leaf | "WT, Control" | 520.96 | HC |
| SRR2154078 | seedling | Rathuwee_seedling | 46.34 | HC |
| SRR2154079 | seedling | Heukgyeong_seedling | 103.41 | HC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 12.92 | HC |
| SRR10690145 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 254.75 | HC |
| SRR10690144 | leaf | IR24_0h | 570.31 | HC |
| SRR10690147 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 173.66 | HC |
| SRR10690146 | leaf | IR24_Xanthomonas oryzae pv. oryzae_8h | 244.81 | HC |
| SRR10690143 | leaf | IR24_0h | 557.73 | HC |
| SRR10690142 | leaf | IR24_0h | 593.74 | HC |
| SRR2646852 | panicle | FP | 145.49 | HC |
| SRR2646853 | panicle | FP | 105.04 | HC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 41.50 | HC |
| SRR3955352 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 16.04 | HC |
| SRR10690149 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 259.62 | HC |
| SRR10690148 | leaf | IR24_Xanthomonas oryzae pv. oryzae_24h | 208.33 | HC |
| SRR2646854 | panicle | SP | 67.95 | HC |
| SRR2646855 | panicle | SP | 83.34 | HC |
| SRR5049786 | ovary | floret length/mm: 2.6-2.8 | 313.62 | HC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 79.45 | HC |
| SRR5049784 | anther | floret length/mm: 6.0-6.5 | 52.39 | HC |
| SRR5049785 | anther | floret length/mm: >7.0 | 46.29 | HC |
| SRR4098203 | seedling | No treatment | 20.11 | HC |
| SRR5049783 | anther | floret length/mm: 4.3-4.5 | 31.80 | HC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 36.91 | HC |
| SRR3234044 | pollen | floret length/mm: 3.80-4.30 | 72.78 | HC |
| SRR5049782 | anther | floret length/mm: 3.1-3.3 | 36.62 | HC |
| SRR6365692 | panicle | Wild type | 29.78 | HC |
| SRR6365693 | panicle | Wild type | 37.15 | HC |
| SRR6365694 | panicle | Wild type | 38.93 | HC |
| SRR5929445 | leaf | "O sativa, IL, adapters: standard" | 117.38 | HC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 313.42 | HC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 110.59 | HC |
| SRR6810101 | seedling | seedling | 243.15 | HC |
| SRR8258068 | leaf_sheath | S_bph feeding_early | 1091.68 | HC |
| SRR8258069 | leaf_sheath | S_bph feeding_early | 953.01 | HC |
| SRR3234041 | pollen | floret length/mm: 3.80-4.30 | 87.13 | HC |
| SRR5049781 | anther | floret length/mm: >6.5 | 34.41 | HC |
| SRR8258063 | leaf_sheath | S_bph feeding | 1062.09 | HC |
| SRR8258060 | leaf_sheath | R_bph_late | 1502.39 | HC |
| SRR3234040 | pollen | floret length/mm: 2.50-3.00 | 69.59 | HC |
| SRR12416738 | lamina_joint | sRNA_LJ_S5 | 57.96 | HC |
| SRR12416739 | lamina_joint | sRNA_LJ_S5 | 114.46 | HC |
| SRR10690158 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 386.54 | HC |
| SRR10690159 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 347.46 | HC |
| SRR1849784 | root | Control 120min | 38.70 | HC |
| SRR6365691 | panicle | Wild type | 40.53 | HC |
| SRR12416730 | lamina_joint | sRNA_LJ_S1 | 37.17 | HC |
| SRR10690153 | leaf | IRBB5_0h | 63.46 | HC |
| SRR12416732 | lamina_joint | sRNA_LJ_S2 | 45.85 | HC |
| SRR12416733 | lamina_joint | sRNA_LJ_S2 | 101.21 | HC |
| SRR12416734 | lamina_joint | sRNA_LJ_S3 | 113.46 | HC |
| SRR10690157 | leaf | IRBB5_Xanthomonas oryzae pv. oryzae_24h | 163.73 | HC |
| SRR12416736 | lamina_joint | sRNA_LJ_S4 | 80.25 | HC |
| SRR12416737 | lamina_joint | sRNA_LJ_S4 | 97.35 | HC |
| SRR3110556 | shoot | shoot control | 336.36 | HC |
| SRR771494 | root | Root Cultivar Nipponbare RRF | 89.63 | HC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 18.58 | HC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 294.75 | HC |
| SRR1061616 | panicle | Normal | 47.96 | HC |
| SRR1061617 | panicle | Heat Stress | 104.00 | HC |
| SRR1061614 | panicle | Normal | 59.81 | HC |
| SRR1061615 | panicle | Heat Stress | 103.57 | HC |
| SRR1061612 | panicle | Normal | 67.37 | HC |
| SRR1061613 | panicle | Heat Stress | 97.93 | HC |
| SRR5049793 | ovary | floret length/mm: >7.0 | 82.15 | HC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.83 | HC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 124.73 | HC |
| SRR6810103 | flag_leaf | flag_leaf | 134.24 | HC |
| SRR1061618 | flag_leaf | Normal | 130.64 | HC |
| SRR1061619 | flag_leaf | Heat Stress | 139.08 | HC |
| SRR9937395 | spikelet | sRNA basal spikelets | 863.70 | HC |
| SRR9937394 | spikelet | sRNA apical spikelets | 701.61 | HC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 12.46 | HC |
| SRR8258071 | leaf_sheath | S_bph feeding_late | 937.11 | HC |
| SRR8258070 | leaf_sheath | S_bph feeding_late | 886.96 | HC |
| SRR8258073 | leaf_sheath | S_bph feeding_late | 1061.06 | HC |
| SRR2544788 | embryo | 24 hours imbibition | 300.63 | HC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 14.96 | HC |
| SRR3140954 | leaf | "45C, 12h" | 177.91 | HC |
| SRR089621 | panicle | cold | 148.92 | HC |
| SRR089620 | panicle | drought | 109.29 | HC |
| SRR3140957 | leaf | "45C, 24h" | 415.17 | HC |
| SRR089622 | panicle | salt | 68.59 | HC |
| SRR2544787 | embryo | 12 hours imbibition | 334.19 | HC |
| SRR2544786 | embryo | dry seed | 246.81 | HC |
| SRR4098172 | seedling | Cold (4C) | 71.00 | HC |
| SRR3140956 | leaf | "45C, 24h" | 149.96 | HC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 18.59 | HC |
| SRR3140953 | leaf | "45C, 0h" | 164.42 | HC |
| SRR6810102 | seedling | seedling | 306.92 | HC |
| SRR8258067 | leaf_sheath | S_bph feeding_early | 1125.87 | HC |
| SRR10956502 | panicle | WT | 206.30 | HC |
| SRR2862368 | leaf | viruliferous Infected leaf cells | 163.80 | HC |
| SRR10956501 | panicle | WT | 198.48 | HC |
| SRR8258065 | leaf_sheath | S_bph feeding | 1175.93 | HC |
| SRR12416735 | lamina_joint | sRNA_LJ_S3 | 108.45 | HC |
| SRR8258048 | leaf_sheath | R_bph | 1854.50 | HC |
| SRR1740023 | seedling | IR64-Control | 100.75 | HC |
| SRR2154080 | seedling | Nipponbare_seedling | 41.50 | HC |
| SRR1740025 | seedling | PK-Control | 75.63 | HC |
| SRR1740024 | seedling | N22-Control | 88.03 | HC |
| SRR5120081 | leaf_sheath | PC_48 | 538.02 | HC |
| SRR5120080 | leaf_sheath | PC_6 | 663.82 | HC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 19.29 | HC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 50.12 | HC |
| SRR8258061 | leaf_sheath | S_bph feeding | 1329.57 | HC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 144.72 | HC |
| SRR1654490 | leaf | wild type | 45.68 | HC |
| SRR3110557 | shoot | shoot treated | 315.15 | HC |
| SRR5940086 | panicle | Wild type | 190.27 | HC |
| SRR771499 | embryo | Embryo Cultivar Kitaake NEA | 18.29 | HC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 21.53 | HC |
| SRR8258051 | leaf_sheath | R_bph | 1578.51 | HC |
| SRR504362 | leaf | NPB X 93-11 | 58.74 | HC |