Chr:
Chr10
Start:
21087486
End:
21089420
Strand:
-
Ref_name:
LOC107275624
Sequence
(XR_001540390.2):
CAACGCUCAAGAUCGACUCCACCUCGCACCUCUCCCUACCCCGCGCAUUCUCCUUCCCCUAUCGCUCCCCAGUCCCCACCUCCCCUCCCCGAAUCGUCGCCGCCACCUCCUCCUCUCUCCCGGCGCCGCCGAUCCCCCAACGCCAGCUCGUCGUCGCGCUGAUCUCCCUCACAUCCGUCGCCAUCAGCGAUUGCCACCGAUUCCCCAGCGCCAGGUCGUCGUCGUCGCGGUGACCGAGCCCCCGACGGGGGGGUUCGCGCCGCCCGGGAGCAGGAGGAUCGUCGGGAUCGGGUCCGGGGUGGUCGCGUGGUACCUCGCCUCGAUGGCCCGUGCUGACCAAAGGCGUCGGCGCCGCCGCCAUCUUCAUCGUCAACGACCUCUGCUCUCAGGUGUCAUAAAAUUUGAUGGAAUACCAAUGCCUGUUGCAACAGGGUAAUUUGCCCUCAAUCUGAGGUAUUGCCAUGAAUGGAUAUCCUGCUUAAUGGAUACUGCCGCCAGGAAGAUGUACAUCGCCCUACAGCCACCAAUUUCGAUCGUGUGUGUCUGCAUGGUGGUGAGGUCGUCAGAUCGGAACCCUAAACCCCAGGAAAGGGUUCAGAUCAAAUUUCUGAACUUCAAAUAGGGAAUUGUUUUUCCAUACUGUAAUCGAGUUAUACUGUUUUCUAACCAAAUUGCUAGCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
9.55%
ME_num:
MEP:
77.44%
HE_num:
HEP:
12.8%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
root
Tau :
0.49
Avg Expression:
4.94
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR64 // leaf // ethanol solvent (untreated control)--/--IR64 // leaf // Paclobutrazol (PB) | 6.93849361337414 | 0.00489637610494008 |
2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 1.43281782290399 | 0.0488762289170037 |