Downloadable datasets -> Degradome data
Species:  

Degradome Tissue Description Genotype Processed Data
IR26Seedlingstreated with salt, lab data——
JiucaiqingSeedlingstreated with salt, lab data——
Zhonghua_11Seedlingstreated with gibberellin(GA3), lab data——
GSM476257Young inflorescences (4~6cm)Rice (Oryza sativa) ssp. indica (93-11) plants were grown in the fieldWild-type (INF9311a)
GSM455938Seedling3-week-old seedling; grown in growth chambers with 12-h light/dark cycles, 28 oC during the day and 23 oC during the night.Nipponbare
GSM455939Young panicleRice plants were grown in growth chambers with 12-h light/dark cycles, 28 oC during the day and 23 oC during the night.Nipponbare
GSM434596SeedlingsThree week-old rice seedlings grown on hydropic culture at 25°C with 16h/8h light/dark cycle.spp japonica cv. Nipponbare
GSM1040649Young paniclesZH11 and Os02g12290iL1 were grown in the cabinet at day average temperatures (DAT) of 28°C.Wild-type (ZH11)
GSM1040650Young paniclesZH11 and Os02g12290iL1 were grown in the cabinet at day average temperatures (DAT) of 28°C.tms5 (Os02g12290iL1)
GSM1522117LeafMixture of early,middle and late stage of grain-filling of leavesNei-2-You 6 (N2Y6, age-resistant rice)
GSM1522118LeafMixture of early,middle and late stage of grain-filling of leavesLiang-You-Pei 9 (LYP9, age-sensitive rice)
GSM1626143Leaf Control 30 min; Plants were treated with Margaporthe oryzae elicitors for 30 min and 2 hoursNipponbare
GSM1626144LeafElicitor 30 min; Plants were treated with Margaporthe oryzae elicitors for 30 min and 2 hoursNipponbare
GSM1626145LeafControl 120 min; Plants were treated with Margaporthe oryzae elicitors for 30 min and 2 hoursNipponbare
GSM1626146LeafElicitor 120; Plants were treated with Margaporthe oryzae elicitors for 30 min and 2 hoursNipponbare
GSM2053501LeafThree-leaf seedling; treatment: 45C; treatment duration: 0hHT54
GSM2053502LeafThree-leaf seedling; treatment: 45C; treatment duration: 12hHT54
GSM2053503LeafThree-leaf seedling; treatment: 45C; treatment duration: 24hHT54
GSM2253138paniclesRice plants were grown in the field under long-day (daylength>14 h)NIL(MH)
GSM2253139paniclesRice plants were grown in the field under long-day (daylength>14 h)Nongken58S
GSM2253140paniclesRice plants were grown in the field under short-day (daylength<13.5 h)NIL(MH)
GSM2253141paniclesRice plants were grown in the field under short-day (daylength<13.5 h)Nongken58S
GSM2893504paniclesStage: 2.0 to 4.0 cmNongken58
GSM2893505paniclesStage: 6.0 to 8.0 cmNongken58
GSM2893506paniclesStage: 6.0 to 8.0 cmNongken58
GSM2893507antherStage: microspore stageNongken58
SRR5713893RootPARE analysis of rice: Root_-N_7d——
SRR8184187young_panicleOS_degradome_replicate3, ReproductiveNipponbare
SRR8184188young_panicleOS_degradome_replicate2, ReproductiveNipponbare
SRR8184189young_panicleOS_degradome_replicate1, ReproductiveNipponbare

Crop Bioinformatics Group, College of Agriculture, NanJing Agricultural University
Contact us at huangji@njau.edu.cn (Ji Huang) or 2016201004@njau.edu.cn (Yuhan Fei)