TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Motif file | Method | Retrieve |
---|---|---|---|---|---|---|---|
LOC_Os12g18150.1 | LOC_Os12g18150 | Os12g0279100 | C2H2 | LOC_Os12g18150.meme | ChIP-seq |
TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Motif file | Method | Retrieve |
---|---|---|---|---|---|---|---|
LOC_Os12g18150.1 | LOC_Os12g18150 | Os12g0279100 | C2H2 | LOC_Os12g18150.meme | ChIP-seq |
Detailed methods: Curation and projection of TF binding motifs
motif matrix id: MP00608
species: Oryza sativa subsp. japonica
data origin: PlantTFDB
matrix source: transfer from AT3G48430(Arabidopsis thaliana)
literature source: PMID: SRX1184290
TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Homo TF id | Motif File | E-value | Retrieve |
---|---|---|---|---|---|---|---|---|
LOC_Os12g18150.1 | LOC_Os12g18150 | Os12g0279100 | C2H2 | - | -.meme | - |
TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Description | Retrieve |
---|---|---|---|---|---|---|
LOC_Os12g18150.1 | LOC_Os12g18150 | Os12g0279100 | C2H2 | No obvious motif matrix |