RiceTFtarget

A Rice Transcription Factor-Target Prediction Server Based on Gene Co-expression and Machine Learning


Transcription Factor Detail


TF id Motif Confidence MSU Gene id RAP-DB Gene id Family Motif file Method Retrieve
LOC_Os05g40060.1LOC_Os05g40060Os05g0478400WRKYLOC_Os05g40060.memePBM

Transcription Factor Detail


TF id Motif Confidence MSU Gene id RAP-DB Gene id Family Motif file Method Retrieve
LOC_Os05g40060.1LOC_Os05g40060Os05g0478400WRKYLOC_Os05g40060.memePBM

More details of the curated, non-redundancy and high-quality TF binding Motif ()

Detailed methods: Curation and projection of TF binding motifs


motif matrix id: MP00070

species: Oryza sativa subsp. japonica

data origin: PlantTFDB

matrix source: transfer from AT5G01900(Arabidopsis thaliana)

literature source: PMID: 25215497

Transcription Factor Detail


TF id Motif Confidence MSU Gene id RAP-DB Gene id Family Homo TF id Motif File E-value Retrieve
LOC_Os05g40060.1LOC_Os05g40060Os05g0478400WRKY--.meme-

Transcription Factor Detail


TF id Motif Confidence MSU Gene id RAP-DB Gene id Family Description Retrieve
LOC_Os05g40060.1LOC_Os05g40060Os05g0478400WRKYNo obvious motif matrix