| TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Motif file | Method | Retrieve |
|---|---|---|---|---|---|---|---|
| LOC_Os04g40930.1 | LOC_Os04g40930 | Os04g0486400 | Trihelix | LOC_Os04g40930.meme | PBM |
| TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Motif file | Method | Retrieve |
|---|---|---|---|---|---|---|---|
| LOC_Os04g40930.1 | LOC_Os04g40930 | Os04g0486400 | Trihelix | LOC_Os04g40930.meme | PBM |
Detailed methods: Curation and projection of TF binding motifs
motif matrix id: MP00640
species: Oryza sativa subsp. japonica
data origin: PlantTFDB
matrix source: transfer from MDP0000164819(Malus domestica)
literature source: PMID: 25215497
| TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Homo TF id | Motif File | E-value | Retrieve |
|---|---|---|---|---|---|---|---|---|
| LOC_Os04g40930.1 | LOC_Os04g40930 | Os04g0486400 | Trihelix | - | -.meme | - |
| TF id | Motif Confidence | MSU Gene id | RAP-DB Gene id | Family | Description | Retrieve |
|---|---|---|---|---|---|---|
| LOC_Os04g40930.1 | LOC_Os04g40930 | Os04g0486400 | Trihelix | No obvious motif matrix |