Chr:
Chr6
Start:
24708676
End:
24708696
Strand:
+
Sequence:
ACAGGCAAAGACAAUGACGGC
Length:
21
precursor sequence:
GGGUCCGAGCUGCAUUUGGAUUAGCCGAUCUGGAAGUUAGCAAGUUAGAAACAGGCAAAGACAAUGACGGCUCUUGGAUGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
191
NEP:
69.71%
LE_num:
LEP:
2.55%
ME_num:
MEP:
8.03%
HE_num:
HEP:
19.71%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.92
Avg Expression:
75.23
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.48013167814664 | 0.00478672480858504 |