Chr:
Chr11
Start:
24289002
End:
24289022
Strand:
+
Sequence:
CGAGGACGAGAUACAGUGCAG
Length:
21
precursor sequence:
ACCCGAGGACGAGAUACAGUGCAGCAUCGCGGGACGGAAAUCUUCCUUUGCGUGUACCUUCUCUUGUCCCAUCCUGGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
183
NEP:
66.79%
LE_num:
LEP:
5.84%
ME_num:
MEP:
12.41%
HE_num:
HEP:
14.96%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.95
Avg Expression:
76.64
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | 4.33223673521752 | 0.0470289604481945 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | -1.05381988352835 | 0.0165988025271192 |