Chr:
Chr10
Start:
11842888
End:
11842911
Strand:
+
Sequence:
GAUGACAGCGGUGGUUCGGACAUC
Length:
24
precursor sequence:
CGUCGAUGACAGCGGUGGUUCGGACAUCUUCGGCUUUGUACCUGCUUGGCUUGAUGGCAUCAUCGUUCUUAUCGAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
179
NEP:
65.33%
LE_num:
LEP:
14.6%
ME_num:
MEP:
9.85%
HE_num:
HEP:
10.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.93
Avg Expression:
125.59
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // mature panicle // Wild type--/--PB-1 // mature panicle // ago18(1) | 4.05318211183536 | 1.84912811365998e-05 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | 6.32115844376707 | 0.000211752608801529 |
| 3 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(1) | 5.98769387606661 | 0.000487653399496158 |
| 4 | zhonghua11 // panicle // wild-type--/--zhonghua11 // panicle // rdr701-1 mutant | -3.95533374277417 | 2.45911802515081e-06 |