Chr:
Chr3
Start:
30006963
End:
30006983
Strand:
+
Sequence:
UGGAUGUGACAUACUCUAGUA
Length:
21
precursor sequence:
AAAAAAACGAUUCUAGAACUGGAUGUGACAUACUCUAGUACAAUGAAUCUGGAUAGAGGUAUAUCCAGAUUCGUAGUACUAGGAUAUGUCACAUCCAGUACUAGAUUGAUUUUUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
24
NEP:
8.76%
LE_num:
LEP:
10.95%
ME_num:
MEP:
59.85%
HE_num:
HEP:
20.44%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.86
Avg Expression:
67.49
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | -2.05381706627505 | 7.37767141316445e-09 |
| 2 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 2.36894633993164 | 0.0306698683931606 |