Chr:
Chr2
Start:
7796932
End:
7796952
Strand:
-
Sequence:
AACCGAGCGCGCUGUUGAUUA
Length:
21
precursor sequence:
GGCGGCCGGCUGCGGCGACGGCGGCUUGGAUGGGUCGCCUUCCUCCCUUGCUGCUCGGAUGAACCCUCGCCGCAUGCAUCGCGAUCUUGAUAUUCUUGGCAUGGAAUUAAUAGCGUCUCUUUUUUAUCCCCCUUACGGUUCUUGAUCUCCAGCGCUUCUCUGAAUUCUCUGGUUCUUCUUGCUCGCUCAAUUUACUUGUUUUGUUUUCUCGAUUGAUUGGUUGCCUGAUCAGCUGUGCUGUGGAUGCAUGCGAUGUUGCAAAACCGAGCGCGCUGUUGAUUAAUCUUAUCUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
231
NEP:
84.31%
LE_num:
LEP:
9.12%
ME_num:
MEP:
6.57%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.89
Avg Expression:
0.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(1) | -3.89440405591089 | 0.00147339875898564 |
| 2 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(2) | -3.56680659615364 | 0.0326783219715649 |
| 3 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | 2.65655527261957 | 0.00465177163452543 |