Chr:
Chr1
Start:
40622693
End:
40622716
Strand:
-
Sequence:
ACCUGUUUGGAUUCUUGAGGGCUA
Length:
24
precursor sequence:
CCACCUGUUUGGAUUCUUGAGGGCUAAUUUAAAAUUAAAAUGUGAGAGCUAAACAUUAGUCCAUAGAACCAAACAGGGCCGC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
18
NEP:
6.57%
LE_num:
LEP:
10.95%
ME_num:
MEP:
82.48%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
seed
Tau :
0.61
Avg Expression:
3.15
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | -1.99333005880426 | 0.0310501893956355 |
2 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -4.67822517788538 | 1.7844289449264e-10 |