Chr:
Chr11
Start:
1286653
End:
1286676
Strand:
+
Sequence:
UGCGAUGAUGGCCGCGCGGGUUCA
Length:
24
precursor sequence:
GGCGGGCGGGUGAGCGCGGCGGCCAUGGUUGCGGCGGUGGUGGCGCGCGGCGGCGGCGGCGGCUAGGGCUCAGGCGGCUUGGUGCGGGAGAGAGGCGGCGGCGAAGGGGAGAGAUCGCUUCGAGAGAGUGAUUUUAUAGCGAGGGGAUUAGGGUUUAGCUCUAGUGGGCCAUGGGGGAUAGUUAGUGGACCACUAUGGGCCGGGCUAGAAUUAGUUGGGCCUUCGCGAGCCCAACUUGUGGGCUAGUUUUUCGCUUGUAAAAGGCCAUGGGGGGAGGAGGCGGCGAGCUAGGGUUUCGACCCUCACGAACACUACUUGAUCUUAUCCGAGCUUGCCGUCCGGCGGCGCCGCGGCGGCCGGAGUCGCCUCUCCGACAUUCGCGCCGCCACCGACGUCCUCGUACGGUUGGCGGGAAGGUGGCGCGCUUUGUUGGGGGAAAGAGGCGGGUUCGGUUCCCGUGGCAGUCGCCGGCGGUGAGCGAUGACGACUGCCCGCGGUCGGAGCGCGUGCGAUGAUGGCCGCGCGGGUUCACCCAAACAAC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
76
NEP:
27.74%
LE_num:
LEP:
21.53%
ME_num:
MEP:
50.73%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.67
Avg Expression:
2.09
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -4.7569854277383 | 0.00409057300294348 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -3.79453542767109 | 0.030161167627617 |
| 3 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | 4.34447102708185 | 0.000679940430475545 |
| 4 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_24h | -1.47281868716994 | 0.00125542298864698 |
| 5 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -1.62679407756097 | 0.0123870528380313 |
| 6 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_eaR_bphly | 3.78688070176478 | 0.00167440443139992 |