Chr:
Chr11
Start:
1384745
End:
1384765
Strand:
-
Sequence:
AGUUGCCUACAUGGAGCGCCA
Length:
21
precursor sequence:
CGAUGUGGCGCUCCACGUAGGCAACAAUUUUGCAUCCGGCCCCCUUUUGCAGGACAGCGUGGUGGUAAUAUUGUACUUAGCCCCUUUGAGCCACAGUACCACCCCGAAACUCCCCGAAAUCCCCAAAUCCCUCCUCCCUCACAGGAGCUCAAAGGAGCUAAGUGCAAUUUUUGGAUGAGGCUGGACGCAAAAUAGUUGCCUACAUGGAGCGCCACGUCG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
19
NEP:
6.93%
LE_num:
LEP:
11.68%
ME_num:
MEP:
73.36%
HE_num:
HEP:
8.03%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.92
Avg Expression:
38.83
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -3.40489911601324 | 0.00391120667485992 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -2.54624460855307 | 0.0399671210840201 |