Chr:
Chr3
Start:
27108349
End:
27108369
Strand:
+
Sequence:
UUGUCCCAUUCUAGUUUAGCU
Length:
21
precursor sequence:
UGGGUACCCAUUGUCCCAUUCUAGUUUAGCUAAAUGAACUACUACAGGGAGUAAAUUCUAUGGACCAGGAAAAGUGAGUUUUAGUUAAUUUAGUUGAGCUAGAAUGGGUCAAUGGGUACCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
91
NEP:
33.21%
LE_num:
LEP:
27.74%
ME_num:
MEP:
38.69%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.87
Avg Expression:
3.22
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | 1.58604699808813 | 0.0026634935250889 |