Chr:
Chr3
Start:
3487878
End:
3487898
Strand:
+
Sequence:
UCGGACCAGGCUUCAUUCCCC
Length:
21
precursor sequence:
GGCAGUUGAGGGGAAUGUUGUCUGGUCCGAGACCUAACACCGGGCGGAAUGGCGGAUUCAGCUGCAGCUAAGCAAGCUAGGUGGGGGGUUUCGGACCAGGCUUCAUUCCCCCCAACUCAACUGUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
0
NEP:
0.0%
LE_num:
0
LEP:
0.0%
ME_num:
0
MEP:
0.0%
HE_num:
274
HEP:
100.0%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.82
Avg Expression:
37843.11
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | 1.35099709090809 | 2.17392742491827e-23 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | 1.42872588768234 | 5.89306004323192e-32 |
| 3 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(1) | 2.98755235565364 | 0 |
| 4 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(2) | 2.38107132015202 | 5.51205115079147e-20 |
| 5 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -2.73077428771727 | 9.48654914777638e-246 |
| 6 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.13774162043831 | 3.91525216022376e-10 |