osa-miR156j-3p_miRbase


Function Link


Basic Info

Chr:

Chr6

Start:

26554902

End:

26554923

Strand:

+

Sequence:

GCUCGCUCCUCUUUCUGUCAGC

Length:

22

precursor sequence:

UUGGGGCGGGGCGGGAUCGAGCAUAUGAAAGGCGAGAUUGUUGACAGAAGAGAGUGAGCACACGGCGCGGCGGCUAGCCAUCGGCGGGAUGCCUGCCCCCGCCGCGUGCUCGCUCCUCUUUCUGUCAGCAUCUCUCAUCACUCCCUCCCGCAUCCCCCGCCCCGA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

7

NEP:

2.55%

LE_num:

13

LEP:

4.74%

ME_num:

128

MEP:

46.72%

HE_num:

126

HEP:

45.99%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

shoot

Tau :

0.81

Avg Expression:

195.58

Tip: osa-miR156j-3p_miRbase is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
Tip: osa-miR156j-3p_miRbase is not a differential expression ncRNA.