Source:

XM_026021179.1

Strand on PHAS Transcript:

+

Start on PHAS Transcript:

4739

Sequence:

AUGGAAAUGUUGGUAUUAGUG

Length:

21

PHAS Gene Name:

LOC107277922

Chr:

Chr11

PHAS Transcript Annotation:

chaperone protein ClpC4, chloroplastic, transcript variant X1

PHAS Transcript Sequence:

UGGUUGUUGAAUUAAGCUAGAUUAGCCAGCCAAAGGGCUCUGGAUCGAUACUUACUAAUGCGAGAUUUUAGCAUGGUUGAUUUUAGCAGGUGCAUUGUUGCAAUGUUACACGAAGGCCAAUUCGUCACAGACGAUCUUGCAAAAGCAUGACUCUUUUAGUUCAAUACUGACAAGUCCUUGUUCGAUUUCCGAUUUCCAUGUCAUAUAUAUGUAAUUCUUGUAAUGUUUUUGUUGUGGGAGUGGCUCCGGAUGGGAAGCACGCCCUCGUACGAGCGACAGCAAGAAACCUGGAGCCAUCCACCUCGGGAGAUUGACCGAAGUCGCUGGAUGCUCCGGAGGCCAGCCAGGGCCCCGGAGGCCAUCCAUGGCUCCGGAGACUGUCCAGGAGCUCCGGAAGGCAACUGAUGCUCCGGAGGUCGCCUGUGGGGCUGGAAGUGCCAAGGGGCCCCAAUGACGAGACUGGUGUUCUGGACUUCAGGGGCACAUGGUGACAGACAAUAAAUGUGCACUACGCCCUCUAACUGCCUUUGAUACCGCGGCACGGGCAAAGUGAUGCAGGCUAAUACCCAGAGGAUAUAGCCCAGCCUGGGUAACAGCCAGCACCCUCGGGAGACGCCCCCGCAUCCUUAAUGGGCGCAGCCAUCAUUGUCACUCUGGAAAAGUCUGAAAAACACAAGGCUGGCCCACCAGGCAGCCCUCUAGGGUCCACCUGCAAAUUAGGGCAACUAUAUAAUUUUCCCUUUGUAAUCUUGUAUAAAUAUGUAAACAACGUCCGUUUGAGAACACAUUAAAUACAGAGGCAAUACACCUCCACCUGCUGAGUUUUGUCCCAACAGUUUUGUCAAUCUAACGAUAUGUCCUAUCAUCAAUUUACAGGUUGUGAGGCGAACGACAACUAGAAAUCAUGCCGUGCGCUAUGCUGGUGGCAGCAGCGGUUGAGGUCGCCGUCCCAACCCUGGCUGAGGCUGCAGCCUUGGGAGCCAUAGGUGCAAUUCUGGCAGGGCCCUUAAUGCAGCCAACUAAGGUUCGAUCCCCUGUCAGAGUAAGAAAUAGCAAUUUGAAGUGCCAUGGAACCAAGAUGAGAUCUCCCUCAAUGGUUUCAAUGUCCCAGAGCCAGCGCAUCAAGAUACCGUCUUAUGUCGGUCUAAGCACAGUGCAUACUCCUGCACUACUCACACCUGUCAUUAGCUCGAGAUCGACAAGAACUUUCCAAAAGACAGCAAAAACAAUACAAGAACGGUCUCAUGCCGUUAUGCAAAUCCCUGAAUUUACACCUGGCACUGGCUUGAGAUCAACCAAUGCGAUUCAGAGAACAACAGAAGUACUGCAGAGACAUUCUCAUGUUGGUCUAAGGCAGCCACAUGCUGGUCGUCUAAGAGAAAUGCAUACAGCUUCAGGUAGGCCUGUCAUUGGCUUGACACCAACCAUUGUGUCUCAGAAGACAACCAAAGUGCCGAAACAGCCUCGUUUCGUCGCCAGGGCGAUUGAUAAUUUCAGCAGGGAGGUGAUGAAUGCUAUCGCGGUUGCACACGACGAAGCUCAAUACAUUGCACAUCUCACAAUCGGGAGCACGAACAUCCUGCUUAGCCUCAUUUCACAGUACAUUUGCAUUUUCCUCCUGGAAAUCAUACUCAAUAAGGCUUACAAAAUGUUCAGAGCUGCUGUUAGGAGAGCAACCAGGGGAGCUAAGUUAGCCACACUUAUGGAGUAUGGGACUAAUCUAACAAAAUUAGCAGAGGAGGGUAAAUUGGACCCUGUUGUCGGAAGGCAGAAGCAGAUUGAUCAUGUCGUCCAGAUUCUGAGCAGACGGACAAAGAACAACCCUUGCCUGAUCGGAGAGCCUGGUGUUGGAAAAACAGCAAUCGCAGAAGGGCUUGCUCAGCUCAUUGCCACAGGGGACGUUCCUGAAACAAUUCAACAGAAAACGGUUAUCUCACUUGACAUGGGACUUCUUCUUGCUGGUACGAAAUAUCGAGGAGAGUUGGAAGAAAGACUGAAGAAUAUCUUGGAAGAAAUCAAGCAGAACGGUGAAAUAAUACUAUUCCUUGACGAAGUCCACACUCUAGUAACAGCAGGAUCAGCAGAAGGUGCUAUUGAUGCUGCUAAUAUUUUUAAGCCAGCACUGGCAAGAGGUGAACUACAGUGUAUUGGAGCCACUACAAUUAAUGAAUACAGGAAGCACAUCGAGAAAGAUGCUGCAUUAGAAAGGCGCUUCCAACCUGUAAAAAUUCCAGAGUCAACAGUUGAUGAGACCGUAGGAAUUCUGAAAGGACUUCGAGAGAGAUAUCAGGGUCAUCACAAGGUCCAAUACACUGAUGAAGCCCUUGUUGCAGCUGCUGAACUCUCCCAUAAGCACAUCAGAGAUCGUUUUCUCCCUGACAAAGCCAUUGAUCUGAUGGAUGAAGCAGGUUCGAUCGUCAGGCUAAGAAAUGCCCAGGUAGAAACACAUGCAAGUCCACCAAAAUUAAUUUCUAUCCAUCAUUUCUCCCACGUACACAUUUUUACCAAAUCUCACCGUGAACUGAACCAACAGUGUAAACCAUCGAAGAAGGUUAAUGAUUUGGAGGCAGAGCUCAAGAAAACCUUGAAGGAGAAGAAUGAUGCCAUCAGCAUACAGAACUUCAGAAGGGCAAAGCAGCUUCGCGAUCAUGAGCUGCAGCUCAGGACCAACAUCUCAGCUCUAACUGACAAGAAAACGCAGAUGAUGGAGCCAGACGCCAUUGCCAUGCCAGUGGUCACCGAAGACGACGUCCGGCACGCCAUCUCAAGGUGGACCGGCGUCCCAUUGCACAAGGUGUCCAUGGACGAAUCAAGAAAGCUCCUCAAGCUGGAGGAGGCCCUGCAUCGCCGCGUCGUCGGCCAGGGCGAGGCGGUGGCGGCGGUCAGCCGCGCCAUCCGCCGCGCCCGCCUCGGCCUCAAGCACCCCGGCCGGCCCGUCGCGAGCCUCGUGUUCGCCGGGCCAACCGGCGUCGGCAAGUCGGAGCUCGCCAAGGCGCUCGCGGCGUACUACUACGGCUCGUCGGAGUCGGAGGAGGCGGCCAUGGUGCGGCUCGACAUGAGCGAGUACAUGGAGAAGCACGCGGUGGCGAGGCUGGUCGGCUCGCCGCCGGGGUACGUCUGGCACGGCGAGGGUGGCCAGCUGACGGAGGCGGUGCGACGGCGGCCGCACGCGGUGGUGCUGCUCGACGAGGUCGAGAAGGCGCACCGCGACGUGUUCGACCUGCUGCUGCAGGUGCUCGACGACGGCCGCCUCACCGACGGGAAGGGGAGGACGGUGGACUUCAAGAACACGCUCAUCGUCAUGACGACCAACAUCGGCAGCAGCCUCAUCGUCAACAACGGCGGCGACGGCGCCGCCGCCGCCGGGAGGAUCAAGAACACGGUGACCGACGAGAUGAAGCGCCACUUCCGGCCCGAGUUCCUGAACCGGCUGGACGAGGUGAUCAUGUUCCAGCCACUGACCGAGCUCGAGGUCGGGAAGAUCGCCGGGAUCAUGCUGGAGGAGUUCGCCGGGAGGGUCAGGGAGAAGGGGAUCAAGCUGAAGGUGACGGACAAGUUCAGGGAGCUCGUCGUGGAGGAGGGAUUCGACCCGAGCUACGGCGCGAGGCCGCUGAGGCGGGCCGUCGUGCGGCUGCUGGAGGACACCCUCGCGGAGAAGAUGCUCGCCGGAGAGGUCAGAGAAGGGGAUUCGGUGAUCGUCGACGCCGAUUCAGCUGGGAAUGCCGUGGUCAGGAGGAGCAACGCCAUGCCUGCCUAGCUAGUACUGGUGUGCAACAAUUUAAUUGGAUACGUUUAAGAAUUUGGGAAUAUUUAGCUGUCGAAAUAUUUCAGUUCACAGCCAUAGGAUUUUGUAACUUUGUAUCGGAAGAUACAAAAUAUUGAUUAGUCGGCACAAAGCCAGUAGGUCAAGCUGAGUUCAGUUCAGUGAGACAGUGACUAACAUUAGUACACAAAUGGCAAUCACUGUCGGCCCAUCAGUGCAGUACUUGCAGAACUGAUCCCCAGGGAAUGUGGAAUCAUUAUCAAUUGUGCAAGCACGGUUCAUAUUAUCGCCGAAACAUGGAUAGAACAUUUCACAAUUCAGGUUUAUCGGUGGGUACCGGUAAAACACGAUAUUGGCCAAAAAUUUCGGUCAUUUCGGGUUUAUCAGUGGUUUUUUGAAUUUGCAUGCAUAACACUAUGGUAUUUGACGGCCUACAUGAUUUACAGAUUAUAAAUACUAUUUUUAUACCAAACGGUCUAGAUGCAAUAUACUUGAUUUCCUGCAUAAAUUGAGUUAAUUUUUAACAAAAUUUGGCAGAAAUUUUUUCUUAUCGCCGAUAAAAUUCUGAAUAAUCCCGUUUAUCGGUGCCCCCGAUAUUCCUUUCAUGUCGAUAAUUUAAACCCUCUCCGGUCUAUCCAAAUAAAGCCUCCCUGCAUGAUAAAUAGCAGAGGCACUCCCUUCUAUAUAUGAUAUCAUAGAGGAGUACGUGGGUGCAUAUGAAUGAUAAAAGGGUCAUCAUAUUCUAGCAUCCAAAUAGGAAGUAGAGGCACCAGGAAGCUAGUUUCAUGCAGCUUGUACUUUCAAUGAUCUGCCCACCCAUAAUAGAUUGUGACAACAGUUUGGUGUCUGUACAGAUCAACACUGGCAAGGACGUAAGUCCUAUGCGCUCCUGGUCGAAAACACGACGAUCCAAUGCUAUGCUCUUACUUGGGGAGAAAUACCAUUUCUCAUAUAGGAGGGCCGAUUUCAUACUGUGAUGGAAAUGUUGGUAUUAGUGAGGACAUUCCACUCAGUAUCUAAGAUGAAAGGGCCUAGAAGAGAUGUCUAGGCAGCACCACUCUGUAACAAAAUUGGACUUAAUAUCCAAGGAUUAAAGAUCACUGUUAAAGAUCUCCUGGAGGAGAAUUGAAGCACCAUGAUGUUAGUCAGGUGAUUGACGUUUGAUGGUGUUGACCUUUUUUUAUUUUAGAAAAGGGAUUUUUUACCCGGUCUCUACAUCCAACCGGAUAUACGUGGCCAUUUAAAUUGGAAACUUAGCCCUACAAACAACCCAAUAUAAAAUUCACUCCUAUGGAUAUUCGAAUUCAGGAUCUUAGAGUACUACUCAGGUCACUGCAAGGACUAAGCUACCUGCCCUUUUCACGGUGUUGACUUUUGGAGGUACACAGGCAUGCACUAGCUCAUGGUUGUGCCAGGAGUCCAUCACAGCUUUUGAUUUUAAUUUAGCUGUUUUUUUUUUGCGAGGAAUUUAGCUGUUAUUCAAAUAGGUCUAUCAUACUCUUGAAGAAUCUGAAAUUUUCCAAUGUGUUUGAGAAAGCAGAAGAAUCCGAGUAAAACAAAGGACAUCCGACUAUAUCAUCAUAACUCGUUUUCCAUUCCUUGGAUAAAAUGGACUAAUAGAGAUCAUUCAUGAUUAUAAUGGAAAGGAUAAAUCAGUGAAAUAUAUCAGAGCUUGUGUAUAUAAAUUUGAACUAGGGUUGCAAUCCAAACCAAGAUGAAGGAAUUAGCUACUAGGGGUGUUUUGCCAAGGUCUCGGAGGGGCAUUGCUAAUUAAUUAUUCUCUUUUACAAGAUGUAACCAAUGCUCGUUGAAUAUAAGUUGUAACACAUAUUUUGUGCAACUCGACGGAGCAAACCGGGCAGGAACCCGUGCCCCUAGUUAAUAUUACAAGUUCACUGAUAGCAACCAAGUGCUAGAUUGAAAAAUCUGAUGCGUUCAUCUUCGAGCGCAAUGGAGACAAACAUUAGACUGAUCAAAUCUCACAUAUUUUUGGGGCGGAGAGAGUAUUCAUCUAAACUGAGCUGAAGAAUGGCUAAGUUCACUGUUAUCUCUCUCUCGCCUUUUUCUUUUUGAAAUGAAUGGCAUGAUCCUAA

NE_num:

246

NEP:

89.78%

LE_num:

2

LEP:

0.73%

ME_num:

20

MEP:

7.3%

HE_num:

6

HEP:

2.19%

Type:

HCR (High-Capacity ncRNA)

Tissue :

pollen

Tau :

0.96

Avg Expression:

48.56