Source:
XR_003242058.1
Strand on PHAS Transcript:
-
Start on PHAS Transcript:
728
Sequence:
UAAGAGCAGUAGGAAUGGGAA
Length:
21
PHAS Gene Name:
LOC9272241
Chr:
Chr4
PHAS Transcript Annotation:
uncharacterized LOC9272241, transcript variant X3
PHAS Transcript Sequence:
ACGAGGGGGGGGGAGGGGCAUUCGGGGAAGAGAGAAGGGAAGGGCCUCUUCGUCGGCGGCGACCGCGAGCUUCCGCUUCCGACAUAGCAUCGCCGCUCGCCGGAUCGGAGAGCGAGGGGAGCACGCCGUGCGCGAGGAGGGCAGCGGGGGCGCGCGGGGGAUACGGUUGGAGGCGCUUCAGCUACGGCCGGCCGAGGACCUGCGGCGAGUUGGUUCCUCUUCAGCUAUGCAUCAAGUAAUUAGAAUGCAAGAAGAACAUGGAAAUGAAGGAAUCUUGAAUAUCAUCAUUUCGCCUCUGCAAAGUUUCAGAGAUAUUAAUGAUUGUCCCCCUUUUGUUUUCUCUGCGGAAACAAUUGAGCAAGUCAAAAGGAAGAGGAAGGAGUGAUUAAGAAUAAUAGGAAUGGGAGGCAUUGGGAAACACUCAGCCAAAUUUCCACCUCUAUUGUCAGAGAUGGAAACUAAAGGUUUAGGUUUCCUCCAUGUUCCCAUUCCAACCAUUCUUAGACCCUCUUUCUUCCUCUUCCCGACUCACUGCCAAGGCAUCUAAAUGUGGACAUGGAUACAUUUUGUUUUCUCUAGUAAAUUGGUGUUAGCUGAAAGUAAGAGGAACGAGCACCUAAGAACUAUAGGAAUGGGAGGCAUCAGGAAAAUCAUCAGACCAAAUCUCCAAUACCAGAGGUUAGAGCUUAAUUUGGCUUUCCUUCAUGUUCCCAUUCCUACUGCUCUUAUAAGAGCAGUAGGAAUGGGAAGCUCACCCUCUUUUUGGCACACAGCUACAAGAAACAGAAGCUUGAACAUUUUCUUCAGAGUACUAGAGUAUAUAUAGACCUAUGCAGUGCAGGGCUGUGAAGGAUAAAUGAAUUGAAUCUGGUAGAUGGUGCACAAUAGGACACUGAAGUGAAUGAUCACAUAUAUUGGCCAAGAAACAUGUACAAGUCACUGUACAACAUCUGCAGGGAUGUGAUCUUCUGGGUACAUCAGAAAGCUGAUUGACAUAAUGAAGAGUAAGCAGAGAACAGUGCAGACACUUGGGAUCUUUUGAGAGUAAGAAUUCAGAGUGGAGAAAGAGUCAAUGUGAAUCUGAAUUUAAAGUGGAUCCUGUGGACUGGAUUCUGAUGAAUAAACAUGGUUGAUGUCAAUGAGCAGACGAUUGGAUCAGCUUGGACUGAACACGUACUAUUUUCUGACUGCAAGUCCAAGGAGAGUAACAACUCUUCAGCCAUGCGCAACGGCAUCAAAUAACUCGAAUGCAGGAAGAACAAGGAAAUGAAGAAAUCGUGAAGGGCAUCAUGCAACCUCUGCAAAGUUUAAGAGAUAUUAAUAAACUCAAAUAUUCUUGUUUCAAUUUUGGUGAGAGGCGUAUAUAUAGGUACUACCUUUCUGUUCGGACUAAGUUACAAUGUGCAAAUAGAUGCUAAUUUAUGUACUUGUCCAUUUGGUUGAUGUUAUGUUCCAUAUGAGAUCUCAAUAGUGACAGUUCAUUUUGCAUAUCGUAGCUGCUAAGUGCUGAUAUAUAUAAAUGAUGUACAGUUUGCAAUGUUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
273
NEP:
99.64%
LE_num:
LEP:
0.36%
ME_num:
0
MEP:
0.0%
HE_num:
0
HEP:
0.0%
Type:
LCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
1.00
Avg Expression:
0.20
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: Osa-phasi04g0591 is not a differential expression ncRNA. |