Source:
XM_015772707.2
Strand on PHAS Transcript:
+
Start on PHAS Transcript:
1082
Sequence:
AUGCUAGAAAGUCUUAUAACCU
Length:
22
PHAS Gene Name:
LOC4333090
Chr:
Chr3
PHAS Transcript Annotation:
protein ELF4-LIKE 3
PHAS Transcript Sequence:
UGCCACAAAUCUCAAUCUCUCUCUCUCUAGCAAAAGAUUCUACUCCUACUACUAAUACCCUCCAUCUAUAAAUCUAAAUCUAUAAGAAAAGAAAAGAAAAAUAAGGAGAGCUUUUAAAGCUACAGAGAGAAAUACAGAAAGAAAAGUAUACUAUUCCCCUCCGUAUAUAUGAGGAGGAGAAGAUGAUGGGUCACUGCUAGUGCUGCUAGCCUGAGUAGUUUCGUGUGUCUGAGGAUCUCCUGAUCUCCUCCCUCCCUCUCUCUCUCUCCAUCCCCAUCCAUCCUCCUUUUCCUCCUAUUCCCCUGUGGAAUCUCAUCUUCUUCUUCAUUCCACUUCUCUUCUCUCUCGUGGUCGCAUGAUCUCAUCAGGAGCGCAGAUGCUACGGCGUCCUUGAGAAUUGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAGCAGAAGCAGAAGCAAAGAGGCGAUGGACGGCGACACGCUGUCGGCGGCGGCGGCGGAGGACGGGAAGGUGCUGCACGCGUUCCAGACGAGCUUCGUGCAGGUGCAGAGCUUGCUGGACCAGAACCGGGUGCUGAUCAACGAGAUCAACCAGAACCACGAGUCCAAGGUCCCCGGCGACCUCUCCCGCAACGUCGGCCUCAUCCGCGAGCUCAACAACAACAUCCGCCGCGUCGUCGACCUCUACGCCGACCUCUCCUCCCUCUUCGCCGCCUCCUCCCCCGGCCCCGCCGCCUCCGAGGGCGCCUCCGUCGGCACCGCCGUCCGCCACGCCGGCCACAAGCGUGUCAGGUCCACCCACCUCGACUGAACAAGAACCAUUCUCAUUUUCUCAAUUAACCACCUCCAAUUCUCCAAUUCCAAUUCCAAUUUCGGCUAGCUUAGCUUAAAGAUCGAGCUCUUGCUUGCUUGUAUAUCUAGCUAUAAUCUAUAAAUCUACAUAUGAGCAAUUAACGCCCCCUCACAACUACUCCCGAUGUUUCAUAUUAUAAGACUUUCUAACAUUUGCCUACAUUCAUAUAUAUGUUAAUGAAUCUAGACAUAUAUGUGUGCCUAGAUUCAUUAACAUCUGUAUGAAUGUGGGUAAUGCUAGAAAGUCUUAUAACCUAAAACGGAGGUAGUACAAUCAUCUUCGGUUCUUUCUUGUAGCUGUUGUUUCAUCUUGUUGUAGCUGAUAUGAUGAGCUAUUAUAUGGAUUUUGAUGCAACAAUGCCAAUACAAGAGAGUGAGCACUUCUCUGAAUUCCCAAAAACAUCAUUUUUUUUUCUUUCCAAUCUGAAGUUCAGUAACAGUGUAUCAGCUUCUGUUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
267
NEP:
97.45%
LE_num:
LEP:
1.46%
ME_num:
MEP:
1.09%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
1.00
Avg Expression:
0.77
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | 8.49234797888234 | 0.0115287483069759 |