Source:
XM_015765986.2
Strand on PHAS Transcript:
-
Start on PHAS Transcript:
833
Sequence:
UGGCCGGCCACCUUGAAGAAG
Length:
21
PHAS Gene Name:
LOC4324802
Chr:
Chr1
PHAS Transcript Annotation:
laccase-7-like
PHAS Transcript Sequence:
AUAUAUACUUAUCGUGUUUCUCUGAAGACUUUGCUAUAUACAAGUUGGCCAAGAUCACCAAUAAGGAUUUGCCUAUCCUUCUCUGGCGCUCCUGAAUCCUCUUAGAUGGUUAUACCUUGGUGUUCGUCCAUGAUGCGGCUUUUGUGGUUCUUGUUCGCGCUUCUUCUUGCCAGAUCGGUGGCAGAUGCUGCAACUGCGAACUACACUUUCACUGUGGAAAGCAUGCGAGUCAGUCGGCUAUGCAACAGCACUGACAUUAUUGCGGUGAACGGCCUACUGCCAGGCCCAAUGAUAGAAGUGAAUGAAGGUGACGCAGUUGCUGUCGAGGUCAUCAACGGAUCACCAUAUAACUUAACCAUACACUGGCAUGGCAUACUCCAGCUACUGACGCCAUGGGCGGACGGCCCGAGCAUGGUCACGCAGUGCCCUAUCCAGCCGAACAGCUCGUACACGUACAGGUUCAACGUCACCGGACAAGAAGGCACGCUGUGGUGGCACGCCCACUCCUCCUUCCUGCGCGCCACCGUGUACGGCGCUCUCAUCAUCCGGCCAAGAAACGGCUCCGCCUAUCCCUUCCCCGCGCCGGACCAAGAGGUCCCCAUCGUGCUUGGGGAAUGGUGGAGCCGGAAUGUCGUCGACAUCGAGAGCGACGCCGUCUCAUCUGGCCAGCUUCCCAGAGAAUCCGACGCGUUCACCGUUAAUGGUGUUACCGGCGAGCUCUACCAAUGCGCAAAUGACACGUUCACGGUGGACGUGCAGCCCAACACGACGGUGCUACUCCGGGUCAUCAACGCUGGACUCAACACGCACCUCUUCUUCAAGGUGGCCGGCCAUGGCCGGCCACCUUGAAGAAGCGACGCGUGCUACACCGCCAACUACACCACGGACACGCUCGUGCUCGCGCCGGGGCACACCGUGGACGCGCUCAUGGUCACCAACGCGUCGGCCGGCAGCUACUACAUGGCGGUGCAGGCGUACGACAGCCUGUCUCCGACCACCAUGGCCGUAACCGACGACACCACCGCCACGGCCAUCGUGCACUACAACACCACGUCGACCAAGAAAAACGCGACGCCCGUCAUGCCCACCAUGCCCCAGAGCUCCGACUCCGCGACGGCCAACGCCUUCUACUUCGGGCUGAGGGGCCCGCCGUCUCCCAGCGCGCCGGCCGUGCCGACCAAGGUGGACGUGAACAUGACCAUCGAGCUGGGCCUCGGCCAGCUGCCGUGCGACUCCACACAGAGCAGCUGCUCGGGGAAAUCCGUCGCGGCGGCGAUGAACGGCGUGUCGUUCCGCCUCCCGUCGCAGAUGUCCCUCCUGGAGGCGCAGUUCAACCGCACGCCGGGGGUGUACACCGCCGACUUCCCGGACGCCCCGCAGCCGAGCGGCACGCCGAUGGUCGAGGGGACCAAGGUGCGGAGGCUCAAGUACAACUCGACGGUGGAGAUCGUGCUGCAGAACCCGACCGCCUUCCCGUCGGAGAACCACCCGAUCCACCUCCACGGCUUCAACUUCUUCGUGCUGGCCCAGGGCCUCGGCAACUUCACGCCGGGCAACGUGAGCGGCUACAACCUCGUCGACCCGGUUUCGCGCAACACCCUCGCCGUGCCGACCGGCGGCUGGGCCGUCAUCCGUUUCGUUGCCAACAAUCCAGGCAUGUGGUUCUUCCAUUGCCACCUUGACGCGCACGUUCCGAUGGGGCUCGGCAUGGUGUUCGCGGUGGAUAACGGGACGACGCCUGACUCCUUCCUCCCUCCGCCGCCUGCCGAUCUGCCGAAGUGCUAGAACCUGCAAGAUUCUGGCGUUGGUGUCAAAUUGUAAUGCACUUUCGUAGCCAAAUUUUACUUCAUAUUUGUUCUUGUGUUUGUGUAAAUGGAGUACAGGAGGCACGAAACGAGGUAGUGCCGUUCGUUUAUUUGUUCUGUGUAUGUGUAUCAUGUGUAAACUGUAAAGAGGUCUGUUUUUUUUUUCCUCUCCGGGGGAACGUGUAAACUGUAAAGCAACAAAUGUCAAACUUCAGAUUCCUUUGACUGUGUUAAACAUGAAUUUAUUCCAGGAUACCAAUUAAGCAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
271
NEP:
98.91%
LE_num:
LEP:
0.36%
ME_num:
MEP:
0.73%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.99
Avg Expression:
0.68
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_8h | -8.64562037638226 | 0.0359987305995391 |