Chr:
Chr4
Start:
24388669
End:
24388689
Strand:
-
Sequence:
UUGUUUCACCUAGGACGAGGA
Length:
21
precursor sequence:
UCACCCGUGAAAUGACGUGGUUGUUUCACCUAGGACGAGGACAUGGCAUCCUAUUACCAGCCAUCGCACAAAAUUAAUAGGAUGCCACGUCCACAUCCUAGAUAAAACAACCACGUCAUAUCAUGGGUGAAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
3
NEP:
1.09%
LE_num:
LEP:
5.84%
ME_num:
MEP:
88.32%
HE_num:
HEP:
4.74%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.73
Avg Expression:
10.56
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -1.20078860320355 | 0.04587515470709 |