Chr:
Chr6
Start:
638325
End:
638345
Strand:
-
Sequence:
UAGAUGGCUGAUCUGGUGUGG
Length:
21
precursor sequence:
CCAACUAAUAGCUAUUGAACUAGAUGGCUGAUCUGGUGUGGCUUGGCUUUGGGUAAGAAGGAUUGGCCUCUGUCUAGUGCCUCACUUUCCUUCUGCGGUUCUGUCUACUGUCCUGGUUUGGAAGAAGUCAAACCAAGCCAGAUCAGCCAUCUAGUUGAGUCUCUCUUAGGAGAUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
26
NEP:
9.49%
LE_num:
LEP:
12.77%
ME_num:
MEP:
75.55%
HE_num:
HEP:
2.19%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flag_leaf
Tau :
0.78
Avg Expression:
6.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_24h | -1.36831096498783 | 0.0175781470445516 |
| 2 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -1.80977260089002 | 0.00138415698654363 |