Chr:
Chr3
Start:
26838901
End:
26838921
Strand:
+
Sequence:
AGGGGCUUGCAUAUUCUACCA
Length:
21
precursor sequence:
CUUCUACUUCUUGCGUUGAAAGGGGCUUGCAUAUUCUACCACCCGCUUGAGCAGUGUCGCAUCAACCUAGGAUUUGCUGGGCCUCGCUCCACCGCUGGUUGUAUGACU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
191
NEP:
69.71%
LE_num:
LEP:
6.2%
ME_num:
MEP:
20.07%
HE_num:
HEP:
4.01%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.90
Avg Expression:
14.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | zhonghua11 // panicle // wild-type--/--zhonghua11 // panicle // rdr701-1 mutant | 3.50758443965707 | 1.48130547691216e-06 |