Chr:
Chr4
Start:
21654404
End:
21654425
Strand:
-
Sequence:
UUCCCAAUGCCUCCCAUUCCUA
Length:
22
precursor sequence:
AAGAGGGUCUAAGAAUGGUUGGAAUGGGAACAUGGAGGAAACCUAAACCUUUAGUUUCCAUCUCUGACAAUAGAGGUGGAAAUUUGGCUGAGUGUUUCCCAAUGCCUCCCAUUCCUAUUAUUCUUAAUCACUCCUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
177
NEP:
64.6%
LE_num:
LEP:
10.22%
ME_num:
MEP:
9.85%
HE_num:
HEP:
15.33%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.93
Avg Expression:
126.53
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | -1.50027989844537 | 0.00808406183687136 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.6801525993946 | 0.0024006518002989 |