Chr:
Chr2
Start:
7650769
End:
7650789
Strand:
+
Sequence:
UGCCAAAGGAGAGCUGCCCUG
Length:
21
precursor sequence:
UUGUCAGGGUGAGAAUCACAGUGCAGUUCUCCUCUGGCAUGGAGGGCAAGAGGAGCUGAAUAGCUAAUGGAUGAUAAACUGCUAGCCUUUCCCUGCCAAAGGAGAGCUGCCCUGCCAUUCAGUGACCCUGAAUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
156
NEP:
56.93%
LE_num:
LEP:
16.42%
ME_num:
MEP:
26.64%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.90
Avg Expression:
2.33
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -8.17272076995343 | 3.07671660584364e-07 |
| 2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -8.23048429773483 | 5.11189256703389e-07 |
| 3 | IR24 // leaves // IR24_0h--/--IR24 // leaves // IR24_Xanthomonas oryzae pv. oryzae_24h | 1.6620686395717 | 0.0228770035982285 |
| 4 | Nipponbare // leaves // rice_mock--/--Nipponbare // leaves // rice_RSV | 2.18386838702695 | 0.00613596946279788 |