Chr:
Chr2
Start:
27728695
End:
27728715
Strand:
-
Sequence:
UCCACAGGCUUUCUUGAACGG
Length:
21
precursor sequence:
GCGCGCGCGGUGCCGUGGGCGAGGAGGACGCUGGUGGGGGAGAAGACGAUGCCACCGCCGCCGCCGUUGUUCGCCGGGGUGGCGGCCGCGGAGGCUUCCACAGGCUUUCUUGAACGGCCGCGUCCGCGGUGGACGUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
3
NEP:
1.09%
LE_num:
LEP:
3.28%
ME_num:
MEP:
37.59%
HE_num:
HEP:
58.03%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.94
Avg Expression:
849.38
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB-1 // young panicle // Wild type--/--PB-1 // young panicle // ago18(2) | -1.0134542290605 | 0.012830015604908 |