Chr:
Chr2
Start:
27148167
End:
27148186
Strand:
+
Sequence:
UUGGCAUUCUGUCCACCUCC
Length:
20
precursor sequence:
GGGCGCUUACUGAGAGUUCUUUGGCAUUCUGUCCACCUCCUUGUCGAAUCCUCAGAGACAGAAAUCUCAUAUCUGUUGAUCUUGGAGGUGGGCAUACUGCCAAUGGAGCUGUGUAGGCCUCCCUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
4
NEP:
1.46%
LE_num:
LEP:
1.09%
ME_num:
MEP:
25.18%
HE_num:
HEP:
72.26%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.70
Avg Expression:
160.77
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -1.86882089330314 | 0.0456565451242219 |
| 2 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | 1.44784937536028 | 0.00448020919161791 |
| 3 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | 2.13921989393144 | 7.58256954981557e-06 |