Chr:
Chr4
Start:
21647727
End:
21647748
Strand:
-
Sequence:
UUCCUGAUGCCUCCCAUGCCUA
Length:
22
precursor sequence:
AAGAGGGUCUGAGAGCGGUGGGCAUGGGAACAUGGAGGAAAGCCCAAACUCUUCUUCGCCUCUAGAACUAGGGGCUGAGAUUUGGUUUCCUUGUUUUCCUGAUGCCUCCCAUGCCUAUUGUUCUCAGAUGCUCCUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
183
NEP:
66.79%
LE_num:
LEP:
6.93%
ME_num:
MEP:
9.49%
HE_num:
HEP:
16.79%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.93
Avg Expression:
431.64
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | -2.074907437495 | 0.000249894779380316 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -1.9531810859191 | 0.000508414133286004 |