Chr:
Chr3
Start:
6510880
End:
6510903
Strand:
+
Sequence:
GAGGGAUUUUGCGGGAAUUUCACG
Length:
24
precursor sequence:
ACCAGGCCUCCUUUUGCACGGAGGGAUUUUGCGGGAAUUUCACGGGAAUUGAGUUGAUUCCUGAAAUUCCUGUAAAAUUCUUGUGUUCCAAAGGAGCCCUUGAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
206
NEP:
75.18%
LE_num:
LEP:
14.6%
ME_num:
MEP:
7.3%
HE_num:
HEP:
2.92%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
endosperm
Tau :
0.99
Avg Expression:
201.14
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | -4.0555191277771 | 0.000262023643157134 |
| 2 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | -3.61194336140199 | 0.000821919789249841 |