Chr:
Chr11
Start:
10376266
End:
10376286
Strand:
-
Sequence:
UAUGCGUAAGACGGAUUCGUA
Length:
21
precursor sequence:
GUUUUCUUUAAGAGCACUGCUAUGCGUAAGACGGAUUCGUACUACCUGCGUCCGACCAUAUCAUGUGCACCGAUCACCGUCUUUAGCUUCUCUCCACCAAUGCAAGCAGCAUUCGGAUGCAUGUCGUACGAAUCCGUCGGACGCAUAGCUAUUUUCUUUCUUUAAUUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
77
NEP:
28.1%
LE_num:
LEP:
14.23%
ME_num:
MEP:
47.08%
HE_num:
HEP:
10.58%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.92
Avg Expression:
44.50
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | 2.03462969204831 | 0.0154278106793591 |
| 2 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 2.97624494455589 | 1.22031442240572e-05 |