Chr:
Chr7
Start:
2216844
End:
2216864
Strand:
-
Sequence:
UGCCUGGCUCCCUGUAUGCCG
Length:
21
precursor sequence:
UGAUGAAAAGGUAGGGGAUAUGCCUGGCUCCCUGUAUGCCGCUCGCAUGGCUGCCAACCCAAUGAACUCGAUCUCGUUGUUGGCCGCUGCGUACGGCGUGCGAGGUGCCAAGCAUGGCCCUCUUCCCUUCUCUCUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
2
NEP:
0.73%
LE_num:
LEP:
0.73%
ME_num:
MEP:
40.51%
HE_num:
HEP:
58.03%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.83
Avg Expression:
371.89
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | 1.6139213705311 | 0.0267152039038977 |
| 2 | PB1 // panicle // WT--/--PB1 // panicle // OE_AGO17 | -1.24896722727853 | 9.49891494665023e-09 |
| 3 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -2.64013934117493 | 0.0162002692589084 |
| 4 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_eaR_bphly | 1.27000628434599 | 2.26879350566782e-06 |
| 5 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | 1.22864761476888 | 0.0173775844471254 |