Chr:
Chr6
Start:
28081049
End:
28081069
Strand:
+
Sequence:
UGCCUGGCUCCCUGUAUGCCA
Length:
21
precursor sequence:
UUUUGAUCGGCUUGAGAGCGUGCCUGGCUCCCUGUAUGCCACUCAUGUAGCCCAAUCCAUGGUGUGUUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCGUGCCAUGAUCUCUCUUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.36%
LE_num:
LEP:
0.36%
ME_num:
MEP:
35.4%
HE_num:
HEP:
63.87%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
lamina_joint
Tau :
0.87
Avg Expression:
438.87
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | 2.81912749065942 | 0.000476343594513471 |
2 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(1) | -1.29159366001136 | 0.000276121711816319 |
3 | PB-1 // seedling // Wild type--/--PB-1 // seedling // ago18(2) | -1.22471326997603 | 0.00038840001417947 |
4 | IRBB5 // leaves // IRBB5_0h--/--IRBB5 // leaves // IRBB5_Xanthomonas oryzae pv. oryzae_8h | -2.21916596924577 | 0.0430043001049405 |
5 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_eaR_bphly | 1.35532151262879 | 4.92922954792202e-10 |