Chr:
Chr1
Start:
38527376
End:
38528432
Strand:
+
Ref_name:
LOC9268440
Sequence
(XR_001547362.2):
CCGAAAAUUCUGAGCUUGGGCUUUGCAGAUGGCCUAGUUGAGUUCAACCAAACUUGUUAAUUUCAUCGAAAAUAUAUAAAUUUGGAAUAAGUUCACUAAGUGACCGGAAUCUAAUCCAUGACCAUAAACCAUAAAACCGGAUAUCUCGAUCCCCUAACUCUUAAAACCGGUGUAAUUUGACUCCCUUAAUGUUUUUGGAGGGCUGUUUCGCUGACGUGACGCCUACGUGGCAUCCCAGUCAUCAAAUAAAUUAAAAAAAAUAAGUGGGGCCUACCUGUCAGUGACUCCACCCCUAUAUUCUCUCUUUUCUCUCUUUCUUGAUGGCAGCGGCAGCGGCUGGACGAGGGGAGCAGCGGUGGCCAUCGGGGCGCAGCGGAACCGGGCCGAGGGCGGCGGGCGGCGGCGGCUCGGCCGCGGCAGUGGGAGGACGAGGGGAACGGCGGCGGCGGCCCGCGCUGCCGCUCAUCGUCCUCCUCCUCAUGGUUACCAGCGUGGUCUCCGACGGCUCGCCGGGGUCGGGGCCAUUUCCAGCUGCAGCUCCGUCCACUCGCGCCGUUCAGCACCGGGGCAGCGGGACUAGCCGCGAUGUUGGCCGCCGGCGCCGCGCUGCUCGUGCUCGUGUGCGCCGCGUCGCUCCGCUGCUCGACCGCGCCCAAGAAGCUCCUCAGUGGCGGGGUCUCCAUCGAGGAGCCGCGCGCCGGCGGCGGCGGCGAGGAGUGCGACAUGUUCAACCCGCUCUACGCCUCCAGGGACUGCCCCUUCCUCGACGUCGGCUUCCGCUGCUCCGAUAACGACCGCCCCGACGAGUAGCUGUUGGAUUGUAAUCUUGAGCAUUUAUAUUCUAUUUUGUUUUGUUGCAUGUAGAGUUCGGUUGGAGUCUGAAUUCUGGCCGGUAGAAUAGCAUUUUCUGUUUUAGCAUAUUUGCUUCAUUCUUUAGCUGCGAUGAUCCGAGAUUGUCGUGAUUCUGUUAUGCAUGCAACAAACUCCGUGUGGAGAUGAAUAAAUAGAAGAGAAAACCGGAAAAGCUGCAUGGCAUUACGCAGCGAAAACUCUGUUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
81.71%
ME_num:
MEP:
18.09%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.75
Avg Expression:
1.62
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 2.56169122069926 | 0.011873327056286 |
2 | Caidao // leaf // none (control)--/--Caidao // leaf // 0.5% Na2CO3 solution for 36h | -8.28453618566515 | 1.89630865175044e-07 |
3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN | 3.33571931665928 | 7.26238500559669e-05 |
4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dN | 2.56670734631916 | 0.0160440483212027 |
5 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 12hA | 2.26943752453551 | 0.0233037033068949 |
6 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 1.8339775178169 | 0.000188737103011501 |
7 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dN | 3.29108581545482 | 7.12816216582508e-05 |
8 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -4.64339736338097 | 0.0333267402603985 |
9 | Nipponbare // shoot // No_DIS;_mock_inoculated--/--Nipponbare // shoot // No_DIS;Fr13_inoculated | 1.53543962004501 | 0.0381677112493036 |
10 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hA | 2.57567452741178 | 0.0104903430647671 |
11 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 2dA | 2.03919674800907 | 0.0382966916701549 |