Chr:
Chr11
Start:
24386120
End:
24392626
Strand:
-
Ref_name:
LOC4350954
Sequence
(XM_026021748.1):
AUGGGACCCGGUUCAAUUCGGAUCUUUUGCUCUUAUCUUCUUGUAUCUACUCAUCGUGAGGCAGAGACAUCUAAGUUGACUCAAGUUGUCCAAUCAGGAUCAGGCAUGGUUUAAAUGGGAUUGCUAUGAUUGCCUGGUUGUUGCUUGACCACAGCUUUAGCCAUCAAGGUUAGGCAAUCUUAUUGUCAACUAUGACUUAUUUUGAGCAUGGGUAUGAUUGUCUUAUCAUCAGGUACAGCUAAUCAACAAAGCCUUAGAGGACACUCUUUGUUUAAGGCAACAUAACAUGUUGUUGGUGGCUUGUUGGUCUCAUAGGAACAAUACUAUUUCACCAACUGUGCAACUUGCAUAUAUAGUUAGUGGAAACAAAACUCAAACACAUAUUCUAAUGGAAUCUCAAAGUAAAUGGAUCUCAUCUCCAACCAAUCUUAUAAAUAUAUACAUCUGUAGUCUUCUCUUGUUGAAUACUCCUAGACAGUCGGCCAUUAGUGACAACAAGCAACUUUGAAGGUUGCAAACUAAUAAUUAAAUCAGAGUCAAUACGAUUUAGGGGGAAAGCAUACCCUAUAAGGUUCCAGUAUUGUUGAUGUGAUACAAGAAGAGGAUGCUUAAUACAAACUUCUCUUUAGUUCCAACCAUUACUAUGAUCCUACAUUAAUUCAUUGUAUGAUAUGCUGUUGCUGGUGAUAACUGGUAAGACCAAUGGUUUCCAUCAGUUAAUAGAGAGUUCAGAUUUCUUCCUCUUUCUUUUCUUCAUGUCCCCCAAUUUCAUGCCUGAUUUGUCUGUGCUGAUCAUGCAGUGUUAGCAGAAGUUUAAUGACUGAUGUGCACAUUUCUAUUUUCUGGCCUUCUGGGGAAUUAUAGUUGAAGAGAUCUUAUUUGGACUUUGGUAGGAUCAAUUCAUCUGAGCACAUACCACGCCCUUUGUGCAUCACUCUGUCGCCUAUUAAUAUGUCCAUAUGUGAUCUAAGGUUUUAUCUUGGUGUUUUAUUGCUGACAAUCCUCUGCCAUCUAUCCAUUGGUAUCUUAAUGGGUUAUUUAUCAGAGGAAACUAAUUUUGGAAGAUUAAUAGGCUAUUGUUAAUUCUUACUGCCGGCACUUCUUUUUUUGCUGGACAUUGGACUGUAAAUGUAAGGUAAGGCUUCUUCACAUCUUGCAUCAUAUUUUUUUUGAAUGAUGUGAAUGCAGUGAAUAUGCUGUAACUACCUACAGUUAUAAAUGAUCCAGUGUCUUGCACAUUGGCCUACAUACAUGCUUAUGCAAAAGCUAUAGGUACACUAAAGUUAUAACCAAGGAUCUAAAUCUCAGCGGUAACCAGCGUAUCUCCAGGCCUAGUGACAGUGUCCCACUUGCUGAGUUCCAGGAAGCUCUGAACCUGAAAACACAAUUGAGCAUUCCUCAAGCAGACUUUCUCACCUACAGCCAAUUUUUUAGAAAUGUUUUUGUUAUAGGUGACUCCAUCCACAACAAAUUAAUGUCUCAAGUUUUACUCUUUUUUUUUCUAAACACAAGUUUUACUUUUUAAAGUAACAAACGUUCCACUUUGAUCGCCAGUUUUAUUCUAUAGAUUUUAAUAAAGUGUUCUUAUUACUUGCAUUAUUUAUCAAUUAUCCAUGACGUAAGUCUUAUGCAAUAUGUUUGGUCAAACCAAUAUGUUUUUGAUUGCACAUAGUUUAGGGCAUCAUUUUUUGUGAUAGGACUACCAUUUUAAGAAGUACAGUGUCAUCAGGCACCAGCAUAUCAAAUCUUUGGCGAUCACUGUAAUUAGCCCAGCAAAUUAAUGUACAAUGAACAUGUUUGCAGAGUUGUAUGCGAUGAUAACUCUUGGUGCUGUAAUAUUCUGCCCACCUGCUUACAAUCUAUUUCAGUUCUGUUGCUUCUGUAUGUUACUAAAAACAUAUAGCUGCAGUCCUCUAUUUCAGAGAUGCUCCGAGAUUUAACUGUAGUGAGCUUUUCUCCAUUUUUCAGACUGUGUUGUUCUUGCUGGGCACUUUUCCUGGUAGUUUUGGCAGAUCUCCUUGAACCAGUUCAUCUAUGGCAGCCAUAUUGGGUUCUUUAGUUGGAUCAUGUGCUAAGAAGUUGCAAGAGAUCAUUACAGAUGAGGCAAUUCUAAUUCUAGGUGUGAGAAAAGAGCUUGAAGAACUACAGAGGAGAGCAGACAUCAUAAAGUGUUCUCUUAAUGAUGCUGAGGCAAGGAGGAUGGAAGACACAACAGUUGAAAUGUGGCUUGGACAGCUAAGAGAUGUUAUGUAUGAUGUUGAUGAUACCAUUGAUUUGGCCAGAUUUAAAGGAAGCAUGCUGCUAUCUGAUCAUCCUUCAGCAUCGUCAAGCUCAACCAAAUCGACUUCUUGUGGAGGCCUUUCACUUUUGUCUUGCUUUUCUAAUACUGGUACACGCCAUGAGCUUGCUGUUAAGAUUAAAAGCCUUAACAAAAAGAUAAAUAACAUUGUAAAUGACAAAGUAUUCUUAGGACUUGAGAGUACACCAUCCACUGGAAAAGAUUCAGUAACACCACAGGAAAGAAGUUCCAAACUAGUGGAACCAAACCUUGUGGGAAGGGACGUGGUACAUGCUUGCAGAAAAUUAGUGGAUCUGGUCAUUAAAAAUAAGGAAAAGACGGCCGAUAUUGAAAAUAAGGAAAAGAAGGCUGAUAUUGAACAUAAGAAAAAGGAACCCUACAAGCUUGCUAUUGUUGGAACUGGCGGAAUUGGUAAGACCACACUUGCUCAGAAAAUAUACAAUGAUAAGAAAGUGGAAGGGAACUUCGACAAACGUAUAUGGGUUUGUGUUUCCAAAGAGUACCUUGGAACGUCUCUAUUGAGAGAAGUUCUUCGGGGUAUGGGUGUGCAAUAUGGAGCAGAUGAAUCACUUGGUGAGCUGCAAGUCAAGCUUAUCUCAGCCGUUAGUGAGAAGAGUUUUCUCCUAGUGCUAGAUGAUGUGUGGCAAUCUGACGUGUGGACUAAUUUACUACGGAUUCCACUGCAUGCUGCAUCAACAGGAGUAAUUCUAGUAACUACUCGACUUGAUAUUGUCGCUCGGGAAAUUGGGGCAGAUCACACUCAUCAAGUUGAUUUGAUGUCAGAUGAUGUAGGAUGGGAGCUACUUUGGAAGAGUAUGAACGUCAUUGAAGAAAAACAAGUGCAAAAUCUGCGUGAUAUAGGGAUGGAGAUUGUUCGCAAGUGUUAUGGCCUUCCCCUUGCAAUAAAGGUUAUUUCCCGAGUUCUAAUCAGCAAAGAUAAAUCAGAGAAGGAAUGGAAAAAGAUAUUGAACAAAAAUUCUUGGAAAACGAACAAUUUUCCUAGUGAAAUAAUAGGUGCUUUGUAUCUGAGUUACGAUGAGUUGCCACAACAUUUGAAGCAAUGUUUUCUUUAUUGUGCUAUAUACCCCGAGAAUUCAACAAUUAACCGUGAUGAUAUUACCAGAAUGUGGAUAGCUGAAGGCUUUAUAGAUGAGCAGGAAAGCUCUACAGAUGAACAGAAACACCAACUACUAGAAGAUACAGCAGUAGAAUAUUACUAUGAGCUGAUCCACCGGAACCUCCUUCAACCAGAUGGUUCACAUUUUGACCAUAUUAGAUGCAAGAUUCAUGAUCUCUUAAGGCAGCUUGCUUUUCAUUUAUCAAGACAAGAGUGUUUUGUGGGAGAUCCAGAAACACAAGGUGGUAACAAAAUGAGUGUAGUGCGACGUAUUUCAGUUGUGACAGGAAAGGACAUGGUGGUAUUACCUAGGAUGGAUAAGGAGGAAUAUAAAGUAAGGACUUACAGAACUUCAUAUCACAAGUCACUGAAAGUUGAUAGUUCACUUUUCAGGAGACUUAAAUAUCUCCGUGUUUUGGAUUUGACUAAAUCAUAUGUACAAAGCAUCCCAGAUAGCAUUGGAGAUUUGAUUCAUUUGCGUUUACUUGAUCUUGAUAGCACUGACAUAUCUUGUCUUCCAGAGUCCCUUGGUUCUCUUAAAAACCUUCAAAUACUGAAUUUGCAAUGGUGCGUUGCUUUGCACAGACUUCCUUUGGCGAUCACUAAGCUGUGCAGUCUUAGACGGCUUGGUAUUGAUGGUACACCAAUAAAUGAGGUCCCAAUGGGGAUAGGAGGAUUGAAGUUCCUCAAUGAUUUAGAAGGAUUUCCUAUUGGUGGUGGUGGUAAUGAUAAUGCUAAAAUACAAGAUGGAUGGAACUUGGAAGAGUUGCGUCCUCUUCCGCAUUUGAGGAAGCUUCAGAUGAUCAAAUUGGAAAAGGCAGCUUCAGGCUGUAAAGAUACAUUGCUAACAGACAAAGGGUAUCUCAAAGUCUUAAGACUAUGGUGCACUGAGCGUACAAAUGAACCAUAUUCAGAAAAAGAUGUUAGUGACAUAGAGAAUAUGUUUGAGAAGUUAAUCCCUCCAUGCACUCUAGAAGAUCUAGUUCUCACAAGAUACUUUGGUCGAAAGUAUCCAACAUGGCUUGGUACUACCUAUUUGUGCUCACUAGAAUAUCUGACUCUAAGAUGGUGCAAAUCAUGUGUAUGUCUUCCAACAAUUGGGCAGUUGCACAACUUGAAAUAUCUAAGGAUUGAGGGAGCAAUAGCAGUUACCAAGAUUGGACCAGAAUUUCUUGGCUGCAAGCUCAGAACCACAGAGGAGGCAGUAGCAUUCUCUAGGCUUGAAUUGCUUACCUUUACAGAUAUGCCCAAUUGGGAGGAGUGGUCCUUUGUUGAAGACGAUGAUGAAGCAGCAGCAACAGCAGAGCCUGUAGCAAAUGAAGGGGAGGCGAAUGAUGCUUCUGCAAAGCCGAAAGGGGAAGCCCCAGUUGGAAGGUUGCAGCUGCUGCCAUGUCUAAAGAAGUUACACCUUCGUAACUGCCCAAAACUGAGGGCUUUCCCGCGACAGCUUGGGAAGGUGGCCACCAGCUUGAAGGUGCUCACAAUAGGUGAAGCAAGAUGCUUGAAAGUUGUGGAGGACUUCCCAUUCCUUUCUGAUAACCUUUCGAUCAUUGGAUGUAAAGGUCUGAAGAGGAUCUCUAAUCUUCCACAGCUGAGGGAUCUGCGUGUAGCCCGUUGCCCAAACUUGAGGUGUGUCAAGGAGUUUGGCUGUCUGCAGCAGCUGUGGCUGGGCGUGGGUAUGCAAGACGUGUCUUCAGUAUGGGUGGCCGGGCUCCAAGGACAACACCGGCAAGAUCAUGGAGAUGAUCUGGAUGUCUACACAUGGCAACUUCGUGUAGGCUGAGAGGCAAAGACGCAGUUAAAUGGAGAUAAUAAAUGGUAUGAAAUGUAAUACUUGAUAAUGAAUUUAGUUCUUUUAGCAUGUCUUGAUUAUGCCAUCUGAAUUUUGCCCUCCUGAAUCUCAAUGCUGCCGCCUUGUUGGAUUGUACAUUCCAGCAUGUCCAUAUUGGAUCAAAAACAAAAUCACGUUAGUGUCGAUCACAACCUUCAUGUGGAGAGCAUUAUUCGUUUAUUAUGAGAUUUAUGUACUUUGUACUGUUUGGUUUUGUAUAUAGAAUUAUGUAUAGAUUCAUGACAUCAAAGAUUUUCAUAAAUUGGUACGUUACUAGCCUUGGCUCCCAUGUUUUAUUUUAGAAGCAAAACCCUGUUUGGGGGCAGAAGAAAAAUAAUCUGAGUCCACUCUUGAGUCUCAACUUUGUAACUCGUAUUUCUAUACUCGCGUCGUUUAUGAAGUCCUAAAAUUAGUCUUGUUUACAUAGCCGUACUUAUUUUAGUUCUUGUUUACCUUUGUAGGUCGUUAAUCUUGCAGACCCAUGCAAUUUAAUCUUCUGUUGUAUAACUUCAUCAUCCUUUCUUGAACUCUAUAAGGUCGAUGCUAGAAUAUAUUUAAAAAAAGAUUUGGAAAAGCAUCAAAAUAGAAAAGCAAAUACCAAAUGUGUUGGUUGCACAUUCAAGCAAGAUGAAAACACAUGGGGUCAACAUUUCCAUUGAGUUAGCGGCACAUCCACAAAUACUUGGAUGCAACAUGCUAAAAUAGAAGGAAAAAUCAGCAAUUUCACUCAUGUGUGUUAUAGUUACAGAAGGAGACAAGUAAACAAAUGAGAAACAGAACAGAACAGAUUACAGGCUACACAUCUGAGUAUCUGACACCACAAACUUAGUAAAAAAAUCCAUUACAGUGUUAUAAUUAAUAUGUUUGUGUUCAAACUAAACCUGCUAUAUUUCACCAGAUAGAACGUAUUUCAGAUAAUGUCUAAAUCAGCAUAUUGAACUUGGUGAGCAUUUUGAAAAAAAAAAGAAUAAAGAAAUGCAUAUCCUGUCCACUCUCUCCAGCUGAAUUUUUGCGGCCAUGAUUCAUAAACUAUAAUCCAGUUCAAAUGCAAAGAAUGAAAGACAUGCUGCUGUGAGAUUUCUAAGCCACAAAUUCAAGACUGCGCUUAGCAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.53%
ME_num:
MEP:
4.27%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.89
Avg Expression:
0.66
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA | 1.18800986555868 | 0.0432774100563898 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hN | -1.91992030535825 | 0.0226217403764472 |
| 3 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | -3.21574153430863 | 0.00805191788423025 |
| 4 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 3hA | -1.97886275519875 | 0.0137714699471686 |
| 5 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | 3.38855014123842 | 0.000442428077628911 |