Chr:
Chr9
Start:
8969410
End:
8973920
Strand:
-
Ref_name:
LOC4346704
Sequence
(XM_015795926.2):
UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGGAGGGAUCGAAGCAGGAGGCCUGAGCCCAAGAAUCCAGCUGGAUUAGGUUACCAUUUUCAUCAAUCUGAGUGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA
Sequence
(XM_015795927.2):
UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGGAGGGAUCGAAGCAGGAGGCCUGAGCCCAAGAAUCCAGCUGGAUUAGGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA
Sequence
(XM_015795928.2):
UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
3.05%
ME_num:
MEP:
88.41%
HE_num:
HEP:
8.33%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot_apical_meristem
Tau :
0.76
Avg Expression:
24.63
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated | 1.16061968182634 | 0.00127200726635772 |