OSA-PHAS4346704


Function Link


Basic Info

Chr:

Chr9

Start:

8969410

End:

8973920

Strand:

-

Ref_name:

LOC4346704

Sequence
(XM_015795926.2):

UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGGAGGGAUCGAAGCAGGAGGCCUGAGCCCAAGAAUCCAGCUGGAUUAGGUUACCAUUUUCAUCAAUCUGAGUGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA

Sequence
(XM_015795927.2):

UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGGAGGGAUCGAAGCAGGAGGCCUGAGCCCAAGAAUCCAGCUGGAUUAGGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA

Sequence
(XM_015795928.2):

UAGGUAAAUUUUGCUGAAGCAAAGCGAGUCCAAGACUAGCCUUCACAUUCCGCCACCAAAAUCCGGCCGCCAAAACCCUCGCCUCCUUCCCCCCACGCCGCGCUCCGACCUCUCGCCGCCGGCGAGCCCCCGCGUGAUCUCCAUCCUCCAACGCAGCGCCGCCGCCCGCCCGCGCUCCCGACCACCGCGGCCCUAACGCGCUGCGCCGGGGGAGCUUCCCGUCUCCGCGGCGCUGCUUCGCGUACGCCUCCUCCUCCUCCUCCCGCCGCCGCAAUUCCGACCUCCUGAUGUGCUCCGAGAAAGGCAUCGGGGAGGAGCCGGCUGUUGCCCUCGCCGUCAAUCUCUGAUUUCCACCCAAGGAGUGUUACACCGGCCUUGACACAAUUAAUUGCAAUACUACUGUUUCUGCUGACCUGCUUUGGUCUAGUGGGAGAUCAAGUGUUAAUGUUUCCGAUUUGUGGUAUCUCCAGGACAGUGACUGAAAGUACACAAAGAGCUGAACAAAAGAGCUAUUGGGUAUAUUUCCCUUAACAGUUUGUUGGGAACAUUUGCCAAAUAGGUGGUUCAGAAUUGCCUCCAAACCCAUGUGUUUCACACACAUCUGAUCACACCCAAUAUACACAUUCCGUACAAUCUUCUCUCGUUUGCAAUGGGUCCUCGCCCACCUGGUGGUUCUUCAGAUAAAAAAAGUUGUCAAAAUGUCACACCAGAUAAAGACAGCUCUAUGAAUUUCUGCCACCAACAAUAUCCGCAGCACCUAUUUUCACAACCACCAUAUGCAAUGAAUUUCCCAUUCCCACCAUUUCCUCACUACCCUCCAUACACACAAAAUUUGCAAUAUGCUGUUCCACCACAAUAUGCUCCAUACACAUUACCACCUCCUGCUGGAGCUAUGCCAUCAACAUUUUUACCUGCUCCAGUUAUUCCAUCCAAGGCACCGUCUGACCAAGGCACCCCGCGUUCAAUAACUGGUCCAGGAGAACAAGGCACUGACAAUGCUGAACCUGAGAAGGCUACUAAGCGACUAUAUUGGACAGAAAAGGAGGACAUAAGAUUGAUAAGCGCCUGGUUGAUUUAUUACAAGACUGACAGGUACUGGGAAAAGGUUGUAGCAGAAUACAACAGUACAAUCCCUGCAACUCGAAGAAGGGAACUUCAACAUGUGAAGGGCCACUGGCACAAGAUAUUCAGAAAGGUGGCACACUUCCAUGAUUGUUGGUGCCGGGUUAAGGCAAAAUAUCCUAGUGGCCACUCUGAGGGCAUGCAACUGAUGGACAAAACUUGGCUGAUGUAUAAUGAGGAAGCACGUGUGAUGUAUCUUGAAGAAGCAGAGCAUAAUUUCGCCUUCGACCAUUGCUGGAAAGCAGUUUGGAACCAACCCAAGUGGAAAGCAUACAUGUCUUGUUUAUUUACGAAAAGAACAAUGCAGUCUGAUUCUUGGGAGUACAUGUCGUCUUCUGAAGACUCUGAAGAAAUGCCUGGAAAAGAAAUAGGUGAAGAAGUUUGCAUGACAUCUAAGGAAGCUAAAGUUAAGAGGUCAACUUCGUCUUCAGAGAUGCAAGAAGACAUGCUUAUCAAGAACCCUGAGGAGCUGACAGAAGUAGAGCCUUCUAUCUCCAAUGAAAAGCUUCUGUUGGCCAGUUUGAAACAACAAGAUGCUUGCACCAAGGACACAGGAAUUUCCAAGAAGCAAUCAGAAUUAUUGACAGCUGAUACUUCCUGGCCCACUGGAUUUCGUCUUGUUGACACUUCAGAAUUGAAUGAACAUCAACAGGGGUUGGCAGUAAGGGAUGAUAUGCUUGAAAAAGAAUCACGUCCACAAGGUUUCGAUGCACAAGACAACGAGAGGGCGACAAGGGAAAACAUUCCUAGAAAAGAAACACAGCCACGAAUUUGCAAGGCACCAAAGUUCAGUCGGAAACGUAAAGGCAAGGCAUCGUCUUCCUCAUGCGAGGUGCAAGAAGACAUCAAACAUGCGAUGCAUCUUCAGACCAUGCUUAACAAUGAUCGUGUGAAGAUGUCAGAGGUACAGCUCCGCCUCUCGAAAGAGCAGCUUGAAUUGGCCAGAAUAAAGCAGGAAGAAGCAAGGGAGAAGAAGGAAACUACACUUUACAAGAAGUACACGGAGCUGUUGCUGGCAGACACUUCAAGGUUCGAUGAGUUUCAGAAGGCAGAGUAUGAGAAAGCACUGAGGCAUAUAGGAGGAAUGCUAUUCAGCAAGGAUGGCAAUUAGUGCCCUUGCUUCAAUUUGUCUUAAAGCGUUACUGUGCAAAUGUCAUCUCAAGCACUAGCUAGUCAUAGAUCCUUCUAUUCUACCUGUUGAAUGAAGGGACUAGUCAUAGAUCACUUGCAAGUUUAGCCUAGACUUACUGACAUCCAGUUUGUGGAACUUGACUAAUUGAAUCCUGUAAGUGAUGGAUCAAUAUGUAGUCAGCUUUAGUUGGCUCGUCUAAGUUCUUAGGAAUGUUCAUUCAGCUGGCAGAAAUGUCCAUUUUGCUAACCUGAUCUACACUAGCAAGAAUGCUUGAACAGUGAUGUCUAUGCAACAUCGACGGCAAGAAUGCUUGAACAGCUAUAGUGUAGAUAAGGCAACCUCUUUGUUGGUUGUCGUGAGAA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

15

LEP:

3.05%

ME_num:

435

MEP:

88.41%

HE_num:

41

HEP:

8.33%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

shoot_apical_meristem

Tau :

0.76

Avg Expression:

24.63

Tip: OSA-PHAS4346704 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Nipponbare // shoot // Drought_during_3_days;_mock_inoculated--/--Nipponbare // shoot // Drought_during_3_days;Fr13_inoculated1.160619681826340.00127200726635772