Chr:
Chr8
Start:
22904762
End:
22908290
Strand:
+
Ref_name:
LOC4345789
Sequence
(XM_015793953.1):
UCAAGUUUCAACCUCCCUUCUCCAACUUGCAAUGUCUUCAUCUCACACGGUGACAGUCUCCAUGGAUGUUGAAGCCGGACAGAAAAACAAAGAUAAGAAGGGGAUCAGCCAAGAUCUGAUCCUGGCUUACAAGACUCUUGGUGUUGUUUUCGGUGGCCUUGUUACCUCACCACUCUACGUCUACCCAUCCAUGAAUUUGACGAAUCCUACUGAAGAAGACUACCUGGGAAUAUACAGCAUCAUGUUCUGGACCCUCACUCUCAUUGGCGUAGUCAAGUACAUAUGCAUCGCUCUCAACGCUGACGACCACGGCGAAGGUGGCACAUUUGCCAUGUAUUCUCUGCUCUGUCAGCACGCAAACAUUGGGAUCCUUCCAUCCAAGAAGAUCUACACUGAAGAAGAGAACCUGAUCUCGAAUCAGCCUGUCGUAGCUGGAAGGCCUGGAAGACUGAGAAGGUUCAUCGAAAGCAGCAUAAUCGCCAGGAGGCUGCUGCUGCUCACAGCCAUCCUAGGCAUGUGCAUGCUCAUCGGCGAUGGCAUCCUCACUCCUGCAAUCUCAGUCUUGUCAGCGAUUGAUGGACUCAGAGGCCCGUUCCCAUCCGUCAGUAAACCUGCUGUGGAGGGCCUGUCGGCCGCGAUUCUCGUUGGGCUGUUCUUGCUGCAGAAGUACGGCACGUCGAAGGUGAGCUUCAUGUUCUCGCCGAUCAUGGCGGCGUGGACGUUCGCCACCCCGGUCAUCGGCGUGUACAGCAUCUGGCGCUACUACCCUGGCAUCUUCAAAGCCAUGUCGCCGCAUUACAUCGUCAGAUUCUUCAUGACGAACCAGACCAGAGGCUGGCAGCUACUCGGCGGCACCGUCCUCUGCAUCACAGGUGCCGAGGCGAUGUUCGCGGAUCUUGGUCACUUCAGCAAGAGGUCCAUCCAGAUCGCGUUCAUGUCGAGCAUAUACCCUUCGCUGGUGCUGACGUACGCCGGGCAGACGGCGUACCUGAUCAACAACGUCGACGACUUCAGCGACGGGUUCUACAAGUUCGUGCCGCGGCCGGUGUACUGGCCGAUGUUCAUCAUCGCGACGCUGGCGGCGAUCGUGGCGAGCCAGUCGCUGAUCUCGGCCACCUUCUCCGUCAUCAAGCAGUCGGUGGUGCUGGACUACUUCCCGCGGGUGAAGGUGGUGCACACGUCCAAGGACAAGGAAGGGGAGGUGUACUCGCCGGAGACCAACUACAUGCUGAUGCUGCUGUGCGUGGGCGUCAUCCUCGGCUUCGGCGACGGCAAGGACAUCGGCAACGCGUUCGGGGUGGUGGUGAUCCUCGUGAUGCUCAUCACCACCAUCCUGCUCACGCUGGUGAUGCUCAUCAUCUGGGGCACCCACGUCGUGCUGGUGGCGCUCUACUUAGUGCCGUUCCUGCUCCUCGAGGCCACAUACGUGAGCGCCGUGUGCACCAAGAUCCUCCGCGGAGGGUGGGUGCCGUUCGCGGUGUCGGUGGCGCUGGCGGCGGUCAUGUUCGGGUGGUACUACGGCCGGCAGCGGAAGACGGAGUACGAGGCGGCGAACAAGGUGACGCUGGAGCGGCUCGGCGAGCUGCUGUCCGGCCCCGGCUUGCGCCGCGUCCCGGGCCUCUGCUUCUUCUACAGCAACAGGCAGGACGGCGGGUGGCUCACCCCGGUGCUCGCGCACUACAUCAGGAACAUGCGGUCGCUGCACGAGGUGACCGUGUUCCUCACGCUCCGGUACCUGCUGGUGGCGAAGGUGGACGGCAAGGACAGGGUGCAGGCCGUGCGCCGGCUGGGGCCAGCGGGGGUGUACGGCUGCACGAUCCAGUACGGGUACGCCGACGCGAUCGACUUCGAGGAGGACGACAUCGCCGGGCAGGUGGUGGGGGCGCUGCGGGAGCGGGUCGUCGACGGGGAGGAGGAGGGGGAGCGGGUGGAGGCGGCGAGGGCGGCCGGGGUGGUGCACGUGAGGGGGAAGAUGAGGUUCCACGUCGGGAAGGACACGAGGCUGUUCGACCGGGUGCUGCUCGGGUUCUACGAGUUGCUGCACGGCGCGUGCCGCUCCGCGCUGCCGGCGCUCGGGAUCCCGCUGCAGCAGCGCGUCGAGAUCGGCAUGCUCUACAAGGCCUAACGGCGCCGAACGCCACGCACGCGCCCCACGAAUCCGUACGUACGUACGUGGCCAUUAAUUACCAUUAGCAGUAUAACCCCUAUUAUUAGUGUGGAUAUUAUGGGUACCCCAUACCCAUACGGCAUGGUUAUCCGACCAGUCAUAGGGGAUAACUUAUAUCUAUAGAAUAUGUAAUAGAUCAUGACUCGGGUAUUACGUUUCCUUAUAUAUUACGGAACAGCCUAAAGUCCUGGUUUGAUAAUAUUGUAAAGUAGAUUUAGGAAACCGAUACCGUAUUGGUUAAGGUUUCUAUCUUGUAAUCCUGCCCCCCACCCUAUAUAAGGUGGGCAGGAGGCCCUCUAGGGGGCAUGAGACAACCUGAUCGUCAGAUCUAUAAUACACCCGGCGGAUUCAAAUCCCCAAACAGGAGUAGGGUAUUACCUCUCAUUGAGAGGGCCCGAACCUGUCUAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
58.13%
ME_num:
MEP:
36.38%
HE_num:
HEP:
5.28%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
flower
Tau :
0.90
Avg Expression:
25.46
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 3.5h | 2.48865022139389 | 0.000993106689733557 |
| 2 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 7h | 2.02650846640281 | 0.00396049019987563 |
| 3 | Taichung 65 // shoot_apical_meristem // 0_days_after_shift--/--Taichung 65 // shoot_apical_meristem // 8_days_after_shift | -2.04377809708941 | 0.0160590666362026 |
| 4 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 17.5h | 1.40523881579764 | 0.00135698348825269 |
| 5 | IR64 // panicle // Dawn--/--IR64 // panicle // Dawn + 10.5h | 2.27263536761218 | 2.63189792155136e-08 |
| 6 | IR64 // panicle // Dawn--/--IR64 // panicle // Dusk | 1.72669073978663 | 0.00197433622690598 |
| 7 | Nipponbare // root // "mock,1_day"--/--Nipponbare // root // "auxin(50CM_2,4_D),1_day" | -1.75620691223024 | 7.76704594655413e-05 |
| 8 | Nipponbare // root // "mock,14_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),14_days" | -5.5044952551405 | 2.97218022544469e-08 |
| 9 | Nipponbare // root // "mock,7_days"--/--Nipponbare // root // "auxin(50CM_2,4_D),7_days" | -4.58014760759851 | 0.000118219622743273 |
| 10 | 9311 // leaf // control--/--9311 // leaf // salt | -1.84618839621792 | 0.025841540419772 |
| 11 | Baldo // leaf // control--/--Baldo // leaf // 100 mM NaCl | 4.62664425505468 | 0.0400112023681879 |
| 12 | Nipponbare // leaf // "wild_type,control,2"--/--Nipponbare // leaf // "wild_type,drought,2" | -4.08648296317228 | 2.71482698366756e-05 |
| 13 | Nipponbare // leaf // control--/--Nipponbare // leaf // drought | -4.08661367841103 | 2.77594600605261e-05 |
| 14 | Nipponbare // leaf // "wild_type,control,1"--/--Nipponbare // leaf // "wild_type,drought,1" | -4.08663558546521 | 2.7286668608517e-05 |
| 15 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -7.79443008219939 | 7.5018421471902e-20 |
| 16 | Nipponbare // leaf // Non-inoculated--/--Nipponbare // leaf // Inoculated with Pyricularia oryzae | -6.02262422488373 | 6.64195100753697e-08 |
| 17 | 9L136 // leaf // control--/--9L136 // leaf // salt | -2.09372043577211 | 0.00413763378492242 |
| 18 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -6.42685842635145 | 2.95824708739754e-33 |