Chr:
Chr4
Start:
3426343
End:
3427310
Strand:
-
Ref_name:
LOC112938816
Sequence
(XM_026025255.1):
CACCAGUGCACAUCUUGUUUGCUGUUGUUCUAGCCCUUGUAGAUUCGAACCAGCUUGAUAUAUAGUGAUAUAUACUAUCCAGUCAGGCGUAGUCCAUCAGUGGCAAAUUAACUGUAACGCCAUCAGAUUCAACGAGCGCAUGGCCGGGGCGAUGCCUGGAUGGAUGGGUACCAUGAUGUUCAUCAGAGACUUUCUUUUUUCGAUCCGGGGAGUGGUAGCCCUCAGCUUCAUUGCUCAUGUCGUCCUCGUCUUGUUCGCCGGAGUUCGCCGCCGCCAAGCGACCGGUGGGGCGACAUUCCUCCUGUGGGUGGCAAACGAGGGUGCCCGUUGGGCCCCGACCGCCGCGCUGGGCAUAAUAACCAUCGGCAGCACGGUCCAGGAGAGACAGCAGGCGACGCUCUGGGCGGCGUUCAUGCUGCUGCAUGCUGCCAGGCCGGACAACAUCGCCGCCUACGCCUUGGAAGACAGCGUCCUCUCGCUGCGACAGAAGGUAGAUGUGAUUGCUCAGGUGUUUGUGUUGGAGUUGUUCUAAAUUCACUUCAAGAUAUUGGCCGGGCUUCUGACGAAGCGGAGCGGAGGCCUAAGCCGGAGGCUUGGGCCGGAGCUAGGGUUUCGUGGAGACUUGAUUCUCUUGUAAGCCGCCAUAGGCGUGUAACCCAAAACUCUUGAGAUAGUGAGAUUGUUGCUGGCUGGUGCUCGUGGUUUUUUCCCCUUUCGCAUUAAAGGGGUUUUCCACGUUAAAUCGUGUGUCUCCGCUGUGAUUGUUUUUCGUUUACUUCAUAUUUCUAUACGUCGUUCAUAACAGUUUGGACCCGUGUCGCCUGCCUAUAUCCUGUACCUGAAUAUGUUCGCCAUGCCUGGCGACUCCAUGCUCUGGAUUUCCUCCUUU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
92.89%
ME_num:
MEP:
6.3%
HE_num:
HEP:
0.61%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.97
Avg Expression:
1.72
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| Tip: OSA-PHAS112938816 is not a differential expression ncRNA. | |||