Chr:
Chr4
Start:
17707030
End:
17709410
Strand:
-
Ref_name:
LOC112938781
Sequence
(XR_003242100.1):
UUUGCGUCUUCCGCCUAUCCGACGGUGACGGAUGAGGUGAAAAGAGCCAAAUGCACAUAGGGAAGUGGGUCUCACAUGUCAUCUCCAUCCAUCAUCUUCUUUGCUCUCCCACCAUCUCUUUCUUUACCCAGAAAAGGAUGCUCCAUACAGCUCAUUAGCUAAAAGGAUUUUCAGUAGUAAAGUUGCAUGGAAUGGAGAACCAUUUUCCUUUAUCACUAAGGAAAGGAUUGACACAUGAUACCAGUAGUGAAAAAUAACUAGUUCACCCGGAAUAUUUGACGUUUAGGAUAAGAUUUGAUCAAAAUCUUUUAUAACUUUUAUUAUUUGACAAGAGAUUGGUAGUUUGUGUCAAGAGCAGAAUGAAACUAAGUAAGAAGAAUAGAAGUUUGUGGAACCGGUUAAUACUUUUUCCAUUUAUUGGAUGAUUUUAAUCCUCUAUCCAGUGCAGUGCCACCUGGGUCCAAUCGUUCAUGGAACAUGUAACAAAGCACACAACACGCAACAAACUAAUCAAGCACGCUGUUCAUCUCUUCCUCUCUUCAUUGUUCUCACUAGAGGCUUGUACAUAUUGCUGCUUCUCUCGCCCUUCUCUAUGAUCACGUGAUAUGCAGUAAAAGUCCCAAAACUCCCCAUUCUCUUUGUGUUUCAGAAGACUCAGGGCAGAUCAACAUAGAACUGCUCUAGUCGCCAAUACUGUUGGCCCAAAACCGAGAGACGUUAGCCCAACCUGGUGAAAACCUUGCUACACUCUAAAAGGUAGCUUAAGAGGUGAGGGACUCCCCUCACUUACUUUUAAGUUGAUUCAACUCCCCAUAGAUAAGCAAUGUGGGACUAUUCCCAACAAAUACCUCCACGGUGUCUGCAUUGUGAUGUUAAGCUAGGCACACUGUGUAGGUAAAACACAGGUCUUGCAUAAAGCUCAAUUUCUCGUACAGUAAAAAACUUCUCAAGGGAAUGGCCCCUGGCCCAGAUUUCCAUAUAAAGGAUACGGCGAGGAAAAAAACCUUCUUUAACCUGAAUUCUAAUUGAUUGGAUAUCCUGCAUAAGGAAUCGAAGGAAGACCCAACGAAAAAUGCACACUACUCCCACUUUUCUAUCAAAUCGGUCAUAAGCACUACCUAUAUUCCACAAAAUAGUGCCCCACAAGUAGGAUCUAAUAAAUAGGCAUGUGAUUCCGUAGAAAGACAUCACGACCCCCUAUGAAAAGAAAAGCCAGCUCCGGUUGGUGUCCUGAUGCCUUGCAUUCCAAUUGGCUACCAUCAGUUAUCUAGGCAACUCGUUACAGGCUGCUAAGACUGGCUGCCCCCUGCUUAUUUAACCGUAGUUGCUAUAUGCAACAAAAAAUAAAUAUGUGUGCAUUGUUGACUACAACAACUUCGCAUUGAUUCGUGUUGGUGUAUGUGUGCCUUUGUAAUGCUGCCCUGAAGAUGUUUGCCUGGACAAUUUAGAAGGGACGGGUAGGGAGCUCCUACAAUUUCACUAUAGAAGAAGGGAGAUCUGAGGAUGAUGGGUCCCAUGGCUACACCCCUAGUCCGACUCCUGCGAAAUCUGGGGCAGGUUCUCACAUUUCUCCAUGGGGAGAACACCCUCCUUGCGAUUUCCAGUACUGCGGCGAAAUCGGGGAUGACCGCCAGGAGGAAGAAAAAGAAAGGGAAGGUUGUACAAGUCGCCCGCGGCUUUUCAGACUAUAUAGUGCAACUUGUCUCCCUAGCUCUCUUCUUUUCUCAGAACUAGUCUGCUGGUCGACUAGAAAACACGUGUUAUAUAUAAGUCCGGAUAUUCUUCCGGUUAGUUCUGACUCCUCUAAUAGGUGUGUUGCAUGCUACUUAAUUACAUAAUACUGUGCCAUGGUAAAUUAAACCGGCAAUACUAGUACACAAAAUAACUAGGAGAUUUUCAGGGAUUGGAUGAAUCGAGGGCUUUUACUUGCAUGUGAACUCUGCUGGACAAGAGUUAAUUUAAUUGUUUUGGGAUGAUGUAUUAGUCGAUCCUGUCAGAUUAAAUGGGGGAAUAAUGAAGGUGCACAGUGAUUCGAUGGCUAGCUUUUCUGAGAAUUAUGGUGCAACUGAGCCGUUAAUCCUGUCAAUAAGUUUCGCAUUGGUGAGCUGCAUGCAUCAGCCAGUUCAGGGGAAAGUUUAAACCAAUGGAGAAUAACAUAGUUCAUUUAUACUCUAAUAGAUGCAAGCAGGCAAUGUAUGCGUAAGCUUUUUUAAGAUGUUAACUUUUGUAAAAAAUAUAACGGAACCUUUAUUGAUCAUUGUUGGAGAUAGAUCGUAGCCAGUAGCCCACCCUUUGG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
96.34%
ME_num:
MEP:
3.46%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.97
Avg Expression:
1.42
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
Tip: OSA-PHAS112938781 is not a differential expression ncRNA. |