Chr:
Chr4
Start:
30730247
End:
30737112
Strand:
+
Ref_name:
LOC112938780
Sequence
(XR_003242097.1):
GGGCCCUAAAUGUGUUGGGCUGAUAUAUAGCCCACAGUUUAUUGGGCCCACUUGAGGACCAAACAUUAGCUCUUUAGGCCCAUUUUUUAGGCCCAGUCGUUGGGGAAGCCCGACGAUGGCGAGCAGUCCGCCGCAACAGCCGACGACGGCGGCGGGAGGCGCCGGCGUUCUUCCCGCCGCCGGCGCGCGCGGUGCCCGUCGCCCUGGACGCGAUCCUGUCGCGGCGCGUGGGAGCUCGGUUUCCCGCCGCCGACGAUGUCUCCCUCUGCCCGCCUCGCCGCGCCGCGCCUCGCCGCGCAUCCGAGGACGGGGACAAGCCCAAUCAAUGCCCUGCCGUGGCGGCCUCGCCGCCGGCCACCUCUGCAACCUCGCUUCUCCUGGUAAGAAACCAUUUAGUCUGACUUGCCUGACAACUUCGACAACAAUGCUUAGCACACUGAAGUUGAGGGGGUCUUCUUUGAGCUUUCUUCUCUCGGUGAUGCAGAUGGCAAUGACAAAGAUGGUCAGGUAGGAGAGUUGUGACAAAAGUGUACUCUCGAGCAGUCUGAUUCCCUGGUUCUCUGCAUUACUAUCCUUAGUAGUGGAAUUCUCUUCAAAUGGGAACCACGUCGUGUACGGAGGUAGAUACCUGGAGGCAAGAUGAAGCAGAAUAUGAGACAACAAACGCUGCUUAACGAAAUGCGAUCAGAAAGUCACCCUUGGGUGGAUUAUCAUCUUCGGAUGUUCAAAAGCAGAUCAUUAUUGAGAAAUAAUUCAGGGAAGGAGUUGCAGCUCUGCUUGUCUAAGGUUUGAUCUUUCAGGUGACGUGCAAGAACAUUCUGGUGCUUGGUUAUAUUCUCUGUAAAUGAUGCGACAAUAAGAUGAAAACAAUGGCUCAACUGACUGGAAGCUUGGAUUCACAAGCAUAUGGCCUUGAGAGAACAAUAUGGGAACAACUGCUGGCCGGUGAAGAAAUUCCUUUGCACGCGCUACGACAAUCGGCAGGAGAUAUCACCCUGCUUUAGCCAUGCAGGUCAUUUUCAGAGGCACACAUCCCAGUUCCUAAACCAGGCUGCAAAAGUUGACGAAUGACGACUACUGUGCUCCACUAUUUUGUACUCCAUGCAUCAACUGGGGAAAGAUGGCGAAUUUUAUGGAAUUGCAUGUGAAAAUUGAGCCAUAAUCAUCUGGAAGAACCAAAGAUUGGAACAAAUUCUAGCAACUAUGCGCCUCCCAUUUUGACAUGAACAAAAUUAGAAGUAAUAGUCAUCAACCUCCCAGGUGACCAGAUUUGCUGAGAACGCGGAGAGCAUAUUCUCAGGUUGACAGAAGGUGUGGCAUGUGAUGCAUGCAGGCUUUUGAAUGGAGACUUGGAAUAUUAAUACUCCUACCUUUCAGCAAAUUGAUUGUGGUGUUCUUGCAAGUUGAAGUGGUGUGCUGCGUUGUGGUUUCUGUGAAGCUAGGAGGAGAGCUAUCCUUUUCUUCUUUGGCAAAAAUAAAAAAAAAUCUGUCAAAAAUCUAGGAGAAAGGGUCAACGCACGGUCAACUCCUACCUAUGGUCACGAACUGGGAAAUGGGACAGUGUUUUGACGUUUGAAACUACUCUCCAUCACAUGCAUCUACCUACCUAAGGCCAUUCUCAACCCAAUAAUUAGGAUGAUGUCCAUAGCAUUAAAUAAGUUGCUACUUAGGACAAAAAAUAAUAUGCAAGUGAAUAAAUGAGGAAAGAGAGACAUGGUUUCUACACAACAUCCAAGACAUCAUGUGAGAUAAGUAGCAUUAAAUUGAAGUAUGAAAUAGUGGUGUUUGCAUUGGAAGAGUAGUGUCUAGUACUUCUUGAUGAUGUAGAGUUUAUGGAAACCAUGUCUAGUGUUAUGGGUUGGGACUGUCCUACCACAGAAAAGAAACAUGUGUCCUCUUGCUGUGGCCGAUGAGCAAAUUAAUUAGGAUACGAAGAAUUAUUGACGAGUUUAUAGUGUUUUGAUGUGCUUUUGUCCGUGACUAUUACGUACGGAGAAGGGAAGAACCGAAGAAGAUUCCAUUGCAGAAGAGAACCCACUUGCCACCGGCCGUUACAUCUCCUAUCAUCACUCGUUCACUAUUAGUACUUGUAAUUUAAUUUGUCAUUAUGAUAUGACCAUCCGAUAUUUUACUCAAUAAUUCAAGUGGUUUUGCAGUUUCCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
56.71%
ME_num:
MEP:
43.09%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
anther
Tau :
0.73
Avg Expression:
3.89
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Amaroo // embryo // dry seed 0 h--/--Amaroo // embryo // 24hN | 1.06350213345102 | 0.00225381815634428 |
| 2 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dN1dA | -1.29674455954981 | 0.0112734014786717 |
| 3 | Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 3dA | -1.01678383557601 | 0.0174322966313645 |
| 4 | Nipponbare // leaf // Watered;Long_Day--/--Nipponbare // leaf // Drought;Long_Day | -2.43467184003219 | 0.00390338030772401 |
| 5 | Nipponbare // leaf // Watered;Short_Day--/--Nipponbare // leaf // Drought;Short_Day | -4.18175061609744 | 0.00288489503243985 |