Chr:
Chr2
Start:
1530716
End:
1531550
Strand:
-
Ref_name:
LOC112937962
Sequence
(XR_003240927.1):
UCAUCCUGGAGCGCUGAUAUUGCGAAUAAUGGAAGCAGAAUGCAAGCUAUCGUGCAACGCUAAGCCUAAGUGAAAGACUCACAAUCCAGAGAUGCGCAUGUCGAGUUCCUGACGCCUCCUAAGCUCUAAUUACUCUCUAACUAAGCUCAAGCACUAAGAUACAAUACAGAGCAAUGAGCAUCAACAAGCUAGAGCCUUGAGCAGAAGUAGAGCUUAGCCUUGCAUUCGACAUGCUUGCCUGUUGGCAUGGAGCUAUAAAUAAAUGUAUACUCCCCUGUGAUGUCUUGUUUAUUUGUACUAGUAGGAGCUAGAGUUAACUGUUGUUGGUAUGGCAUUGCUACCCCGUUCAUCUUUUCCAGUGAAAUUUAAGGAGGGGAGAUUUGACACACUUUAUUUUUUUUUCCGGGUCGACACACUUUAUUUCAGUCACAUUAUUCAUCGAUCAGCUGCCUACAUACAGACAUUCAGCGCAGAGUUAAACACGAGCAGAGUGAAACGCAUUUGAUAUUGGAGAAGCACAAGUCAUUCGCUUUCACUGCAAUACACACCGAUCCCAGUAGCCUGUGCAUUGCUUGAUGGAUUCUUGUUGUGCGCAAGGAGGUAGGGAAGGGAAUGCAUUGCUCUGCUAUAAACUGUAGUGUUCAUGUAUGAACGAGGCUGAGUAAUGGAGGUGACAGACCAAUGGUUUAUUAUCCUGGAUCUGCCCCAAUUAUUUUAACUGCCUUUGCAAUAGAACAACGACAAGAAUUAAACUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
1
NEP:
0.2%
LE_num:
LEP:
95.33%
ME_num:
MEP:
4.47%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
spikelet
Tau :
0.96
Avg Expression:
1.49
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 1h50 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 1h50 min" | 5.07465971787742 | 0.0158490774246951 |
| 2 | Nipponbare // shoot // "Control, 22C for 10 min, then 30C for 50 min"--/--Nipponbare // shoot // "Heat, 42C for 10 min, then 30C for 50 min" | 5.78596613145408 | 1.22413030382793e-07 |
| 3 | Nipponbare // shoot // "Control,22C for 10 min, then 30C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min, then 30C for 10 min" | 5.16985967787787 | 3.95425163204047e-08 |
| 4 | Nipponbare // shoot // "Control,22C for 10 min"--/--Nipponbare // shoot // "Heat,42C for 10 min" | 6.9813208442769 | 0.000512337409000008 |