OSA-PHAS107281343


Function Link


Basic Info

Chr:

Chr6

Start:

6712123

End:

6713873

Strand:

-

Ref_name:

LOC107281343

Sequence
(XR_003242859.1):

CAUGAAAUUGACAAAUUAUUUAUGAUCUAAGGGCAAAUUGGUGUUUGCAAUUGCGUGGAUGCUCACACUUAUUGAAGAUAGUUGGUUUACCAUGCGUGACUGUUAUAUUUUCUUAAUGGAAAAAGUACGAAUUACCCUCCCUGAACUAUCGCGGUCGUCCGAAUUAUCCCCCUAAACCACAAAACCUGAUAUUUUUCACCCAUAACUAUGCAAACCGGACGAAUUACCCCCCUUGACUAAAUUCACGGUGGUUUUGAUCUACGUAGCGUACACGUGGCAGUACAGUCAGUAUUCUAUUUGUUAAAAAAUAUAGGACCCACCUGUCAUACUCCUCUUCCAUUCUUCCUCUCUCUCUCACUCUUCCUCUCUGCGGCUACAGGCGGGGAACACGGAGCGGCGGCGGCGAGGGUUACGCGGAGGCGGCGGCGGCUGUGGCCACGACGAGCAGCCGCCCCCUGCGGCUACGGCGGUCUCGCCGACGCGGUUGCCAGAGCGUCGGGCUCCGGCGCCAGCGGCCCGACGGCACGCACGCGCAUGAAACCUAGGUCGGCAAGAGGCCUCGAUCUCUCUCUCCCAACGCCCGACGGCGUGCCCGCACGCGCAUGAGGCCUCUCUUUCUCUCUCUCUCUCCCAACGCAUACGCGCAUGAAGCCUAGGCCGGCAUCGAGGCCGGAGCGGGGAAGACGGCGGAGACGGCAUCGUCGACGUGCCCAGUUACCAAAGGUGACCUUCGCACCGACGACCUUGUCCCCAACCAUGCCCUCCGCCGCGUCAUCCAGGCAUGGUGCGUCGCCAACAACCUCCCUCCUCGCCGCCUUCCCGCAUCACCCCUCCCUGCGCCGCAAUAUUGCUCGUCUCCGGCACCGGAGACAGCAAGCCCGGUGGACAGGGAGGAGCUGAAAGCAUCGCCGGCGGCGGCGUGUCCUCUCCUGGCGACGGUGAGAUGUUCGUGUUCGACUAGAAUACACUGGAUGGAAGCGACGGCAGCCACCACCUGUGGUGGCCAGAGAGCGUCCGUAUUGUAUGCAAGAGUUGUUUGUUGCAUUUGUCGUUCGCCGCGGCGAGUGAGUCGAGUGACUCGUCGGCGUCGUCGGUCCUGCUCAACAACGUCCUGGCGGUGCUGGUGCUCGUCAUGCCGCUCGACGAGGAGGCCAUCGUGGCCAUCGGCUCGUCGAUCACCACGUCGGUGGCGCUGCUCGCCAACGUUGCCAAGCACGGCGACCUGCAGAGGAGGCUCCAGGCGGUGGUCGUCAUUAUGGAGAUCGUUUGUGUUGUCCUCGUGCUGCUCACGCAACGGCGGCGCUACCACCGCCAUUGAUCUCAACGACAACCUCGACGGGAUCAUCGAGAGUGAGAGAGAAGAGAGAGAGAGAGGAAGAAUGGAAGAGGAGUAUGACAGAUGGGUCCCACAUUUUUUUUAAUAAAUAGAAUACUGACUGGACUGUCACGUGUACACCACGUAGACCAAAACCACCGCGGAUUUGGUCGAGGGGGGUAAUUCGUCCGGUUUGCAUAGUUGAGGGUGAAGAAUGUCCGGUUUUGUGGUUUAGGGGGUAAUUCGGACGACCGCGAUAGUUCGGGGGGUAUUUCGUACUUUUUCCUUUCUUAAUCCAAUGGAUCAAAUCUAUUUAUAAUAUCACAUCAACUACUAUUGGUAAAGUGGUAAUAGA


Expression Capacity

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.


NE_num:

1

NEP:

0.2%

LE_num:

379

LEP:

77.03%

ME_num:

109

MEP:

22.15%

HE_num:

3

HEP:

0.61%

Type:

HCR (High-Capacity ncRNA)


Tissue Specific Expression

cutoff: tau > 0.9 and Average expression in the tissue > 10


Tissue :

root

Tau :

0.88

Avg Expression:

2.23

Tip: OSA-PHAS107281343 is not a tissue-specific expression ncRNA.

Differential Expression

cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01


Num. Condition log2(FoldChange) Padj
1Amaroo // embryo // dry seed 0 h--/--Amaroo // coleoptile // 4dA4.86788022390960.00889228480354626
29311 // leaf // control--/--9311 // leaf // salt-1.596857833240432.3593297904517e-05